RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 OR2Z1Q8NG97 314 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SFT2D1Q8WV19 159 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 J3QT63 122 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 RAB5CP51148 216 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM50BP56557 158 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PLPPR2Q96GM1 343 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SRXN1Q9BYN0 137 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 TRGV8A0A0C4DH27 118 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 CST7O76096 145 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 CHATP28329 748 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 C17orf112F2Z3M2 114 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 H2AFB1P0C5Y9 115 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PMP22Q01453 160 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 OR1S2Q8NGQ3 325 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 EDARADDQ8WWZ3 215 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SDSLQ96GA7 329 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 WNT5BQ9H1J7 359 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 NDUFB7P17568 137 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 CEACAM6P40199 344 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 RAB4BP61018 213 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 NKX6-2Q9C056 277 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SLC39A9Q9NUM3 307 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 RASL12Q9NYN1 266 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 A0A1B0GTI1 187 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 NKX6-3A6NJ46 265 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 KRASP01116 189 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 KLK2P20151 261 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 RSPO4Q2I0M5 234 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 ATP1A1-AS1Q5TC04 95 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 OR11H4Q8NGC9 324 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SLC25A40Q8TBP6 338 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 ABHD5Q8WTS1 349 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM30CPA0ZSE6 113 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 ZBTB25P24278 435 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PLGLAQ15195 96 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SOHLH1Q5JUK2 328 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 LIN7CQ9NUP9 197 aaKnown RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 ZMAT5Q9UDW3 170 aaKnown RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 STRAPQ9Y3F4 350 aaKnown RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 S100A8P05109 93 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 BCL3P20749 454 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 HOXA1P49639 335 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 SMIM21Q3B7S5 101 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF488Q96MN9 340 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF75AQ96N20 296 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 IGLV3-32A0A0A0MS00 114 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM33P57088 247 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 VAX1Q5SQQ9 334 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 MOB1BQ7L9L4 216 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 C17orf78Q8N4C9 275 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 SCCPDHQ8NBX0 429 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 CCL28Q9NRJ3 127 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 DHRS9Q9BPW9 319 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 NUP210Q8TEM1 1887 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 DTYMKP23919 212 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 FHL1Q13642 323 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 SNAI3Q3KNW1 292 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 SSX9Q7RTT3 188 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 OR10P1Q8NGE3 313 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 AQP3Q92482 292 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 MRPL24Q96A35 216 aaKnown RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 TNFSF18Q9UNG2 199 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 H2BFSP57053 126 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 DCAF12L2Q5VW00 463 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 OR2J1Q9GZK6 312 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 C9orf172C9J069 976 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 RBM11P57052 281 aaKnown RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 TESK1Q15569 626 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 LIAT1Q6ZQX7 453 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 PSENENQ9NZ42 101 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF724A8MTY0 619 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 OR3A1P47881 315 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 MDP1Q86V88 176 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZBTB44Q8NCP5 570 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 LRRC29Q8WV35 223 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 GUCD1Q96NT3 240 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 FAM24AA6NFZ4 105 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 RPL35P42766 123 aaKnown RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 KCNJ3P48549 501 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF816Q0VGE8 651 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF837Q96EG3 531 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 CXXC4Q9H2H0 198 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 RPL36A-HNRNPH2H7BZ11 118 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ST8SIA5O15466 376 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 HOXD4P09016 255 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 NTNG2Q96CW9 530 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 GPR137Q96N19 417 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 TIMP4Q99727 224 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 FCGR3AP08637 254 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 PTAFRP25105 342 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF674Q2M3X9 581 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 RPL7L1Q6DKI1 246 aaKnown RBP5.47□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM123Q8N131 208 aa5.47□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF319Q9P2F9 582 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 KPTNQ9Y664 436 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 A0A0B4J293 547 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 MFNGO00587 321 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 CA11O75493 328 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 CELA3AP09093 270 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 MDH2P40926 338 aaKnown RBP5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms