RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 FGF16O43320 207 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 LUMP51884 338 aaPredicted RBP9.06□□□□□ -0.96
CSMD2-202ENST00000338325 RAB25P57735 213 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 NXNL2Q5VZ03 156 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 SSX6Q7RTT6 188 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 OR56B4Q8NH76 319 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 PP6455Q8WZ26 134 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 RAX2Q96IS3 184 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 DUX3Q96PT4 197 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 LINC00527Q9UJ94 153 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
CSMD2-202ENST00000338325 LOC107986453A0A1B0GWG9 222 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 AQP12BA6NM10 295 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 ZNF729A6NN14 1252 aaPredicted RBP9.05□□□□□ -0.96
CSMD2-202ENST00000338325 M0R129 80 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 CSN2P05814 226 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 TMEM11P17152 192 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 HOXB6P17509 224 aaKnown RBP9.05□□□□□ -0.96
CSMD2-202ENST00000338325 NFYBP25208 207 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 MTCP1P56278 107 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 HES1Q14469 280 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 PTGES3Q15185 160 aaKnown RBP9.05□□□□□ -0.96
CSMD2-202ENST00000338325 C17orf58Q2M2W7 97 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 KRBOX4Q5JUW0 171 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 UTF1Q5T230 341 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 C9orf66Q5T8R8 295 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 AADACL4Q5VUY2 407 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 LHFPL2Q6ZUX7 228 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 SLC35E3Q7Z769 313 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 FOXRED2Q8IWF2 684 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 AQP12AQ8IXF9 295 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 STPG2Q8N412 459 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 OR5M8Q8NGP6 311 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 OR9G1Q8NH87 305 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 TBX5Q99593 518 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 ASCL2Q99929 193 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 COMMD4Q9H0A8 199 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 IGKV1-9A0A0C4DH69 117 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 A0A1W2PPI3 338 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 METTL15A6NJ78 407 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 IGHG2P01859 326 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 UBCP0CG48 685 aaKnown RBP9.05□□□□□ -0.96
CSMD2-202ENST00000338325 ZNF44P15621 663 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 PRKACBP22694 351 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 PDZK1IP1Q13113 114 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 GID4Q8IVV7 300 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 PRSS35Q8N3Z0 413 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 DRAM1Q8N682 238 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 TCEANCQ8N8B7 351 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 TMEM163Q8TC26 289 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 ADAT3Q96EY9 351 aaPredicted RBP9.05□□□□□ -0.96
CSMD2-202ENST00000338325 COQ2Q96H96 371 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 NSL1Q96IY1 281 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 KIRREL1Q96J84 757 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 ING3Q9NXR8 418 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 OR6C3Q9NZP0 311 aa9.05□□□□□ -0.96
CSMD2-202ENST00000338325 KBTBD11-OT1A0A1B0GTJ5 212 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 J3QR06 171 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 SULT1C4O75897 302 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 KDM4BO94953 1096 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 ATF1P18846 271 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 CHATP28329 748 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 ECI1P42126 302 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 RAB7AP51149 207 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 EFNB1P98172 346 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 ATXN7L3Q14CW9 347 aaPredicted RBP9.04□□□□□ -0.96
CSMD2-202ENST00000338325 DEFB136Q30KP8 78 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 CASC10Q5T4H9 136 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 FAHD1Q6P587 224 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 TEX38Q6PEX7 206 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 UTS2BQ765I0 119 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 CHST4Q8NCG5 386 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 OR8U1Q8NH10 309 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 MUC7Q8TAX7 377 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 RFT1Q96AA3 541 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 PPIL3Q9H2H8 161 aaKnown RBP9.04□□□□□ -0.96
CSMD2-202ENST00000338325 DCLRE1BQ9H816 532 aa9.04□□□□□ -0.96
CSMD2-202ENST00000338325 IGKV1-12A0A0C4DH73 117 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 A0A1W2PQL4 384 aaPredicted RBP9.03□□□□□ -0.96
CSMD2-202ENST00000338325 SEC14L6B5MCN3 397 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 SLC33A1O00400 549 aaPredicted RBP9.03□□□□□ -0.96
CSMD2-202ENST00000338325 RRP9O43818 475 aaKnown RBP9.03□□□□□ -0.96
CSMD2-202ENST00000338325 IGKV1D-33P01593 117 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 IGKV1-33P01594 117 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 IGKV1D-12P01611 117 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
CSMD2-202ENST00000338325 OR2T7P0C7T2 308 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 ZNF20P17024 532 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 KIR3DL2P43630 455 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 DAPP51397 102 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 SCN1BQ07699 218 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 BNIP1Q12981 228 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 MADCAM1Q13477 382 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 HNF4GQ14541 408 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 Q6P435 159 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 OR8H3Q8N146 312 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 Q8NFD4 153 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 SPSB1Q96BD6 273 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 NRBF2Q96F24 287 aa9.03□□□□□ -0.96
CSMD2-202ENST00000338325 HRASLS5Q96KN8 279 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms