RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 TMEM91Q6ZNR0 172 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 C9orf139Q6ZV77 190 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 OR4S1Q8NGB4 309 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 BARHL1Q9BZE3 327 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 HEXA-AS1Q9H8Q6 139 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 SIRT7Q9NRC8 400 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 NDUFB11Q9NX14 153 aa12.99□□□□□ -0.33
MRPL55-202ENST00000336300 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 SLC33A1O00400 549 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-202ENST00000336300 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-202ENST00000336300 OR7C1O76099 320 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-202ENST00000336300 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 GALP22466 123 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 OR3A1P47881 315 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 KCNJ3P48549 501 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 RBM11P57052 281 aaKnown RBP12.98□□□□□ -0.33
MRPL55-202ENST00000336300 MPV17LQ2QL34 196 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 PIGYQ3MUY2 71 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 PAN3Q58A45 887 aaKnown RBP12.98□□□□□ -0.33
MRPL55-202ENST00000336300 BRD3OSQ6XYD6 125 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 TRAPPC6BQ86SZ2 158 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 LRRTM1Q86UE6 522 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 Q8N7P7 452 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 TMEM158Q8WZ71 300 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 CST11Q9H112 138 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 PPA2Q9H2U2 334 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 UNKLQ9H9P5 680 aaKnown RBP12.98□□□□□ -0.33
MRPL55-202ENST00000336300 SPACA1Q9HBV2 294 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 LINC00312Q9Y6C7 94 aa12.98□□□□□ -0.33
MRPL55-202ENST00000336300 A0A087WXM4 84 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 TRGV10A0A0A0MS01 117 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 PDCD5O14737 125 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 CSN2P05814 226 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 ZNF728P0DKX0 622 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 MYL9P24844 172 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 HTR2CP28335 458 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 UBE2E1P51965 193 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 GP2P55259 537 aaKnown RBP12.97□□□□□ -0.33
MRPL55-202ENST00000336300 P2RX3P56373 397 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 ERVFRD-1P60508 538 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 AESQ08117 197 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 SSX1Q16384 188 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 KRBOX4Q5JUW0 171 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 OR4D6Q8NGJ1 314 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 OR6M1Q8NGM8 313 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 ZNF714Q96N38 554 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 PPIL3Q9H2H8 161 aaKnown RBP12.97□□□□□ -0.33
MRPL55-202ENST00000336300 IFT22Q9H7X7 185 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 PLGRKTQ9HBL7 147 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 UBE2J1Q9Y385 318 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-202ENST00000336300 FAM96BQ9Y3D0 163 aa12.97□□□□□ -0.33
MRPL55-202ENST00000336300 TRDV1A0A1B0GX56 115 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 HSPB6O14558 160 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 GEMIN2O14893 280 aaKnown RBP12.96□□□□□ -0.33
MRPL55-202ENST00000336300 RBP4P02753 201 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 CCL3L1P16619 93 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 HILS1P60008 231 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 ZNF273Q14593 569 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 C1orf100Q5SVJ3 147 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 ATAD3CQ5T2N8 411 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 LYPD6Q86Y78 171 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-202ENST00000336300 TPRX1Q8N7U7 411 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 SIGLECL1Q8N7X8 197 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 ZNF565Q8N9K5 539 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 TSPAN14Q8NG11 270 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 SELENOIQ9C0D9 397 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 GAL3ST2Q9H3Q3 398 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 OR6C3Q9NZP0 311 aa12.96□□□□□ -0.33
MRPL55-202ENST00000336300 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
MRPL55-202ENST00000336300 TRAV24A0A0B4J272 114 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 C17orf98A8MV24 154 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 TRIM77I1YAP6 450 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 MGMTP16455 207 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 BAMBIQ13145 260 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 RBM39Q14498 530 aaKnown RBP12.95□□□□□ -0.34
MRPL55-202ENST00000336300 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-202ENST00000336300 NEDD8Q15843 81 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 TAF9Q16594 264 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-202ENST00000336300 CD200R1LQ6Q8B3 271 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 OR13D1Q8NGV5 346 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 KCNG3Q8TAE7 436 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 NEK7Q8TDX7 302 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 DPCDQ9BVM2 203 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-202ENST00000336300 ING3Q9NXR8 418 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 SSR3Q9UNL2 185 aa12.95□□□□□ -0.34
MRPL55-202ENST00000336300 TRAV1-2A0A0B4J238 106 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 A0A1W2PP11 408 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 ODAMA1E959 279 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 FAM90A10PA6NDY2 464 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 FAM90A18PA6NE21 464 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 FAM90A16PA6NEW6 464 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 FAM90A20PA6NIJ5 464 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 FAM90A8PA6NJQ4 464 aa12.94□□□□□ -0.34
MRPL55-202ENST00000336300 FAM90A7PA6NKC0 464 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms