RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SCGNO76038 276 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 LY86O95711 162 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 RLN2P04090 185 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 SCTP09683 121 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 S100A11P31949 105 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 PNLIPRP3Q17RR3 467 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 OR14J1Q9UGF5 321 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 RPL36A-HNRNPH2H7BZ11 118 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 SIRPB1O00241 398 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 CDIPTO14735 213 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 ARR3P36575 388 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 GNG10P50151 68 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 PPA1Q15181 289 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 PAN3Q58A45 887 aaKnown RBP10.77□□□□□ -0.69
LIMK1-201ENST00000336180 FAM214BQ7L5A3 538 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 IL1F10Q8WWZ1 152 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 CDH20Q9HBT6 801 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 OSGIN2Q9Y236 505 aa10.77□□□□□ -0.69
LIMK1-201ENST00000336180 ANKRD30BLA7E2S9 258 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 SERPINE3A8MV23 424 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 ACAA1P09110 424 aaPredicted RBP10.76□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF44P15621 663 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 RCC1P18754 421 aaPredicted RBP10.76□□□□□ -0.69
LIMK1-201ENST00000336180 LUMP51884 338 aaPredicted RBP10.76□□□□□ -0.69
LIMK1-201ENST00000336180 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 MEX3BQ6ZN04 569 aaKnown RBP10.76□□□□□ -0.69
LIMK1-201ENST00000336180 C20orf204Q6ZNR8 217 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF767PQ75MW2 155 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 MITD1Q8WV92 249 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 SLC2A8Q9NY64 477 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 GHRLQ9UBU3 117 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 UBQLN2Q9UHD9 624 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 PLCE1Q9P212 2302 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 PTPRQQ9UMZ3 2332 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 AANATQ16613 207 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 COMMD7Q86VX2 200 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 EDARADDQ8WWZ3 215 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 DCUN1D4Q92564 292 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF471Q9BX82 626 aaPredicted RBP10.76□□□□□ -0.69
LIMK1-201ENST00000336180 COL25A1Q9BXS0 654 aaPredicted RBP10.76□□□□□ -0.69
LIMK1-201ENST00000336180 NIT2Q9NQR4 276 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 OR5AC2Q9NZP5 309 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 CLCF1Q9UBD9 225 aa10.76□□□□□ -0.69
LIMK1-201ENST00000336180 PQLC2LA1A4F0 135 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 MSGN1A6NI15 193 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 TRAPPC2LH3BP13 241 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 LGALS8O00214 317 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 WNT9BO14905 357 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 GPR37O15354 613 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 PDCD6O75340 191 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 ALDH3B1P43353 468 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 PIGPP57054 158 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 SNTB1Q13884 538 aaKnown RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 PLEKHN1Q494U1 663 aaPredicted RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 SPIN3Q5JUX0 258 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 WDR86Q86TI4 376 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 ZDHHC22Q8N966 263 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 SECTM1Q8WVN6 248 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 SPSB4Q96A44 273 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 GMPPAQ96IJ6 420 aaPredicted RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 OR2S2Q9NQN1 319 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 H0YIZ8 118 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 NDUFB7P17568 137 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 PPP1CBP62140 327 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF169Q14929 603 aaPredicted RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 TMEM128Q5BJH2 165 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 VAX1Q5SQQ9 334 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 ZADH2Q8N4Q0 377 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 RBMXL1Q96E39 390 aaKnown RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 RGCCQ9H4X1 137 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 TREM2Q9NZC2 230 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 A0A0B4J2A0 478 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 RPS10-NUDT3A0A1W2PQS6 291 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 RP2O75695 350 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 AADACP22760 399 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 TAS2R46P59540 309 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 SSX2Q16385 188 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 CEACAM21Q3KPI0 293 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 GSG1LQ6UXU4 331 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 MRPL24Q96A35 216 aaKnown RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 RRNAD1Q96FB5 475 aaKnown RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 PLPPR2Q96GM1 343 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 SMIM3Q9BZL3 60 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 OBP2BQ9NPH6 170 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 SHPKQ9UHJ6 478 aa10.75□□□□□ -0.69
LIMK1-201ENST00000336180 C14orf166Q9Y224 244 aaKnown RBP10.75□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF891A8MT65 544 aaPredicted RBP10.74□□□□□ -0.69
LIMK1-201ENST00000336180 WDR1O75083 606 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 DIRAS3O95661 229 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 GPX4P36969 197 aaPredicted RBP10.74□□□□□ -0.69
LIMK1-201ENST00000336180 SWI5Q1ZZU3 235 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 TBC1D28Q2M2D7 210 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 PRAMEF6Q5VXH4 476 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 Q6ZSR3 168 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 ARRDC1Q8N5I2 433 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 TPRX1Q8N7U7 411 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 DTD1Q8TEA8 209 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 C10orf35Q96D05 121 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 DUSP13Q9UII6 198 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms