RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ZNF700Q9H0M5 742 aa12.07□□□□□ -0.48
SF1-202ENST00000334944 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
SF1-202ENST00000334944 NTN3O00634 580 aaPredicted RBP12.07□□□□□ -0.48
SF1-202ENST00000334944 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
SF1-202ENST00000334944 ZFP36L1Q07352 338 aaKnown RBP12.07□□□□□ -0.48
SF1-202ENST00000334944 WIPI1Q5MNZ9 446 aaPredicted RBP12.07□□□□□ -0.48
SF1-202ENST00000334944 DEFB123Q8N688 67 aa12.07□□□□□ -0.48
SF1-202ENST00000334944 ZIC4Q8N9L1 334 aa12.07□□□□□ -0.48
SF1-202ENST00000334944 ANGPTL4Q9BY76 406 aa12.07□□□□□ -0.48
SF1-202ENST00000334944 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
SF1-202ENST00000334944 NXT1Q9UKK6 140 aaKnown RBP12.07□□□□□ -0.48
SF1-202ENST00000334944 GOLT1BQ9Y3E0 138 aa12.07□□□□□ -0.48
SF1-202ENST00000334944 ONECUT2O95948 504 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 GLI4P10075 376 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 B4GALT1P15291 398 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 ZNF708P17019 499 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 KISS1Q15726 138 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 OR51T1Q8NGJ9 327 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 PIGLQ9Y2B2 252 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 XRCC2O43543 280 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 ANGPTL7O43827 346 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 FCGR2AP12318 317 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 TDGF1P13385 188 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 CHATP28329 748 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 DSCR4P56555 118 aaPredicted RBP12.06□□□□□ -0.48
SF1-202ENST00000334944 SUPT4H1P63272 117 aaKnown RBP12.06□□□□□ -0.48
SF1-202ENST00000334944 DLK1P80370 383 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
SF1-202ENST00000334944 EXT1Q16394 746 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 TIPARPQ7Z3E1 657 aaKnown RBP12.06□□□□□ -0.48
SF1-202ENST00000334944 HPSE2Q8WWQ2 592 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 TMEM208Q9BTX3 173 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 C19orf12Q9NSK7 152 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 MED13Q9UHV7 2174 aa12.06□□□□□ -0.48
SF1-202ENST00000334944 A0A0A6YYH2 397 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 A6NJ64 397 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 CDRT15L2A8MXV6 281 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 DHHO43323 396 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 CXCL13O43927 109 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 THBS4P35443 961 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 TRA2AQ13595 282 aaKnown RBP eCLIP12.05□□□□□ -0.488e-8■□□□□ 9.4
SF1-202ENST00000334944 IAH1Q2TAA2 248 aaPredicted RBP12.05□□□□□ -0.48
SF1-202ENST00000334944 C9orf135Q5VTT2 229 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
SF1-202ENST00000334944 WDR5BQ86VZ2 330 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 PRR18Q8N4B5 295 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 NABP1Q96AH0 204 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 SLCO5A1Q9H2Y9 848 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 CCDC187A0A096LP49 1063 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 SUCLG1P53597 346 aaKnown RBP12.05□□□□□ -0.48
SF1-202ENST00000334944 MLF1P58340 268 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 TMEM128Q5BJH2 165 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 HIST2H3PS2Q5TEC6 136 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 DMRTA1Q5VZB9 504 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 NCR3LG1Q68D85 454 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 ZNF774Q6NX45 483 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 P4HA3Q7Z4N8 544 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 C1orf210Q8IVY1 113 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 ADPRHL1Q8NDY3 354 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 RHBDD1Q8TEB9 315 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 HDHD3Q9BSH5 251 aaPredicted RBP12.05□□□□□ -0.48
SF1-202ENST00000334944 GPR173Q9NS66 373 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 DEPPQ9NTK1 212 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 MKRN2OSH3BPM6 223 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 OR4A8P0C604 315 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 SPINK2P20155 84 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 GABRR1P24046 479 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 EIF5AP63241 154 aaKnown RBP12.05□□□□□ -0.48
SF1-202ENST00000334944 SRYQ05066 204 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
SF1-202ENST00000334944 SPINK14Q6IE38 97 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 DOK3Q7L591 496 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 GPR137CQ8N3F9 429 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 PTX4Q96A99 478 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 ZNF845Q96IR2 970 aaPredicted RBP12.05□□□□□ -0.48
SF1-202ENST00000334944 WFDC1Q9HC57 220 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 POMT1Q9Y6A1 747 aa12.05□□□□□ -0.48
SF1-202ENST00000334944 PINLYPA6NC86 204 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 M0R135 149 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
SF1-202ENST00000334944 HIST1H1DP16402 221 aaKnown RBP12.04□□□□□ -0.48
SF1-202ENST00000334944 FGF7P21781 194 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 BLVRBP30043 206 aaPredicted RBP12.04□□□□□ -0.48
SF1-202ENST00000334944 CLEC12BQ2HXU8 276 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 POC1AQ8NBT0 407 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 ZNF799Q96GE5 643 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 C2orf50Q96LR7 162 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 DSPP15924 2871 aaKnown RBP12.04□□□□□ -0.48
SF1-202ENST00000334944 SPRY1O43609 319 aaPredicted RBP12.04□□□□□ -0.48
SF1-202ENST00000334944 RAB1AP62820 205 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 PDCD1Q15116 288 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 CRIP3Q6Q6R5 217 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 C20orf196Q8IYI0 205 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms