RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 FAM90A18PA6NE21 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A16PA6NEW6 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A20PA6NIJ5 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A8PA6NJQ4 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A7PA6NKC0 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A22PA8MWA6 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A12PA8MX19 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A5PA8MXJ8 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A23PA8MXZ1 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 TSPAN15O95858 294 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A15PP0C7V4 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A13PP0C7W8 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A14PP0C7W9 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM90A24PP0C7X0 464 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 CLDN18P56856 261 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 OR4D5Q8NGN0 318 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 HS3ST6Q96QI5 342 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 GINS3Q9BRX5 216 aa20.1■□□□□ 0.81
NDEL1-201ENST00000334527 FAM166BA8MTA8 275 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 NME2P1O60361 137 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 GNRHRP30968 328 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 NHLH2Q02577 135 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 ABHD17BQ5VST6 288 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 CDCP2Q5VXM1 449 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 DPPA2Q7Z7J5 298 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 DMBX1Q8NFW5 382 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 OR10Z1Q8NGY1 313 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 FREM1Q5H8C1 2179 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 ZNF503-AS2A6NEH8 195 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 SYNGR4O95473 234 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 DANCRP0C864 163 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 SPP1P10451 314 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 ZNF616Q08AN1 781 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 MIDNQ504T8 468 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 ZDHHC23Q8IYP9 409 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 AKR1E2Q96JD6 320 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 PRRG4Q9BZD6 226 aa20.09■□□□□ 0.81
NDEL1-201ENST00000334527 C9orf172C9J069 976 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 FGF12P61328 243 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 ZXDAP98168 799 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 CEACAM21Q3KPI0 293 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 SPIN3Q5JUX0 258 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 FAM185AQ8N0U4 392 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 TMEM222Q9H0R3 208 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 Q9N2K0 584 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 IL36RNQ9UBH0 155 aa20.08■□□□□ 0.81
NDEL1-201ENST00000334527 HEXAP06865 529 aa20.08■□□□□ 0.8
NDEL1-201ENST00000334527 MAGEA5P43359 124 aa20.08■□□□□ 0.8
NDEL1-201ENST00000334527 GNMTQ14749 295 aa20.08■□□□□ 0.8
NDEL1-201ENST00000334527 Q6ZS49 121 aa20.08■□□□□ 0.8
NDEL1-201ENST00000334527 TBC1D26Q86UD7 250 aa20.08■□□□□ 0.8
NDEL1-201ENST00000334527 SECTM1Q8WVN6 248 aa20.08■□□□□ 0.8
NDEL1-201ENST00000334527 SH3BGRL3Q9H299 93 aa20.08■□□□□ 0.8
NDEL1-201ENST00000334527 COLQQ9Y215 455 aaPredicted RBP20.08■□□□□ 0.8
NDEL1-201ENST00000334527 NKX2-6A6NCS4 301 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 TRDCB7Z8K6 153 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 HSPB6O14558 160 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 SCTP09683 121 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 SRPXP78539 464 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 SAXO1Q8IYX7 474 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 APOBEC3DQ96AK3 386 aaPredicted RBP20.07■□□□□ 0.8
NDEL1-201ENST00000334527 SPRY4Q9C004 299 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 LUZP4Q9P127 313 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 UBE2J1Q9Y385 318 aaPredicted RBP20.07■□□□□ 0.8
NDEL1-201ENST00000334527 MUC3AQ02505 3323 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 ZNF732B4DXR9 585 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 NAPSAO96009 420 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 TK1P04183 234 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 SNCAP37840 140 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 CAMLGP49069 296 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 FHITP49789 147 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 PPT1P50897 306 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 GUCD1Q96NT3 240 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 USB1Q9BQ65 265 aaKnown RBP20.07■□□□□ 0.8
NDEL1-201ENST00000334527 DDA1Q9BW61 102 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 MTCH1Q9NZJ7 389 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 FOXJ2Q9P0K8 574 aa20.07■□□□□ 0.8
NDEL1-201ENST00000334527 ZNF565Q8N9K5 539 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 HSD17B11Q8NBQ5 300 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 TTTY12Q9BZ98 90 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 CDS2O95674 445 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 COX5BP10606 129 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 OR1C1Q15619 314 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 ZNF695Q8IW36 515 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 NEK7Q8TDX7 302 aa20.06■□□□□ 0.8
NDEL1-201ENST00000334527 TRAPPC2LH3BP13 241 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 NGFP01138 241 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 KCNJ3P48549 501 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 ASCL1P50553 236 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 EWSR1Q01844 656 aaKnown RBP eCLIP20.05■□□□□ 0.8
NDEL1-201ENST00000334527 PEA15Q15121 130 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 TSC22D1Q15714 1073 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 SRSF7Q16629 238 aaKnown RBP eCLIP20.05■□□□□ 0.8
NDEL1-201ENST00000334527 AKIRIN2Q53H80 203 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 ZNF818PQ6ZRF7 136 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 SUMF1Q8NBK3 374 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 RXFP4Q8TDU9 374 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 BOD1Q96IK1 185 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 PLA2G3Q9NZ20 509 aa20.05■□□□□ 0.8
NDEL1-201ENST00000334527 CACFD1Q9UGQ2 172 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms