RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TMED7Q9Y3B3 224 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MPDZO75970 2070 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 A0A096LPK6 155 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TRBV7-1A0A0A6YYK4 115 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 LOC100506127A0A0U1RQW1 187 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TCRBV7S3A2A0A539 114 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 C9orf170A2RU37 121 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ISPDA4D126 451 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR5H14A6NHG9 310 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SMIM23A6NLE4 172 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 A8MUI8 341 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 E5RI56 91 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 GTPBP1O00178 669 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 NDUFB3O43676 98 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF737O75373 536 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SUPT3HO75486 399 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 VAPBO95292 243 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 LY6G6CO95867 125 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HPRP00739 348 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TFAP2AP05549 437 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 APRTP07741 180 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 LINC00694P0DN24 101 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 GZMBP10144 247 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MYL2P10916 166 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DBTP11182 482 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HMOX2P30519 316 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 IFNGR2P38484 337 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 VHLP40337 213 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MNDAP41218 407 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 NCALDP61601 193 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 EFNB1P98172 346 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 IFITM2Q01629 132 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SLC7A5Q01650 507 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PLP2Q04941 152 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PRKCDQ05655 676 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 BNIP2Q12982 314 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 GAGE1Q13065 139 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF273Q14593 569 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TIGD6Q17RP2 521 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DEFB110Q30KQ9 67 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 FAM98BQ52LJ0 330 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 KLHL12Q53G59 568 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ALG10Q5BKT4 473 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OGFRL1Q5TC84 451 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MFSD4BQ5TF39 518 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 C1orf140Q5VVS0 124 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RAET1LQ5VY80 246 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DGAT2L7PQ6IED9 249 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TRMT10BQ6PF06 316 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DNM1P34Q6PK57 102 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SSX9Q7RTT3 188 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 COMMD6Q7Z4G1 85 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ERI1Q8IV48 349 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MSRB3Q8IXL7 192 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CPNE9Q8IYJ1 553 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OFCC1Q8IZS5 231 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CNEP1R1Q8N9A8 125 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF565Q8N9K5 539 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR10AD1Q8NGE0 317 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR5J2Q8NH18 312 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HUS1BQ8NHY5 278 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TRUB1Q8WWH5 349 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ASB13Q8WXK3 278 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PHYHIPQ92561 330 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DGCR14Q96DF8 476 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CMTM5Q96DZ9 223 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 IFT27Q9BW83 186 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ACPTQ9BZG2 426 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR51V1Q9H2C8 321 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 XKR8Q9H6D3 395 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 POLD4Q9HCU8 107 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SCRT2Q9NQ03 307 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 AKIP1Q9NQ31 210 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM100Q9NV29 134 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RNF24Q9Y225 148 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF257Q9Y2Q1 563 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HEY1Q9Y5J3 304 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 N6AMT1Q9Y5N5 214 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SMG1Q96Q15 3661 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 A0A0B4J203 849 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 A0A1B0GW55 424 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 A0A1W2PRQ8 180 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MEIOCA2RUB1 952 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 LRCOL1A6NCL2 159 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 C16orf90A8MZG2 172 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 H3BUX3 64 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SULT2B1O00204 365 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ISLRO14498 428 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ADAM20O43506 726 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 NDUFS7O75251 213 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 BANF1O75531 89 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MOSP00540 346 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MT-ND1P03886 318 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ANXA2P07355 339 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 P0C879 139 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DUX4L2P0CJ85 424 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DUX4L3P0CJ86 424 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DUX4L5P0CJ88 424 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DUX4L6P0CJ89 424 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DUX4L7P0CJ90 424 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms