RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NPBWR1P48145 328 aa10.31□□□□□ -0.76
HDAC6-201ENST00000334136 TMEM33P57088 247 aa10.31□□□□□ -0.76
HDAC6-201ENST00000334136 THNSL2Q86YJ6 484 aa10.31□□□□□ -0.76
HDAC6-201ENST00000334136 POC1BQ8TC44 478 aa10.31□□□□□ -0.76
HDAC6-201ENST00000334136 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
HDAC6-201ENST00000334136 IGKV1D-42A0A075B6H8 117 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 C7orf77A4D0Y5 90 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 RER1O15258 196 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 RAC2P15153 192 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 FIP1L1Q6UN15 594 aaKnown RBP10.3□□□□□ -0.76
HDAC6-201ENST00000334136 SKA3Q8IX90 412 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 C17orf78Q8N4C9 275 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 UBAC2Q8NBM4 344 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 MDS2Q8NDY4 140 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 SLC17A5Q9NRA2 495 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 KCNIP1Q9NZI2 227 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 TNFSF18Q9UNG2 199 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 MRPS18CQ9Y3D5 142 aaKnown RBP10.3□□□□□ -0.76
HDAC6-201ENST00000334136 C5orf49A4QMS7 147 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 AQP7O14520 342 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 GPR37O15354 613 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 ZNHIT1O43257 154 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 RPS4XP62701 263 aaKnown RBP10.3□□□□□ -0.76
HDAC6-201ENST00000334136 ZP4Q12836 540 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 PRSS54Q6PEW0 395 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 CLEC18BQ6UXF7 455 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 LIPHQ8WWY8 451 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 OBP2BQ9NPH6 170 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 LPAR3Q9UBY5 353 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 IGLV3-32A0A0A0MS00 114 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 LRRC3CA6NJW4 275 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 M0R135 149 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 SOCS1O15524 211 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 HIST1H1DP16402 221 aaKnown RBP10.3□□□□□ -0.76
HDAC6-201ENST00000334136 TNFSF4P23510 183 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 LTC4SQ16873 150 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 TMEM41BQ5BJD5 291 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF684Q5T5D7 378 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 FNDC7Q5VTL7 733 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 Q6ZS92 163 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 GPX8Q8TED1 209 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF799Q96GE5 643 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 PIEZO2Q9H5I5 2752 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 FAM208BQ5VWN6 2430 aa10.3□□□□□ -0.76
HDAC6-201ENST00000334136 H7BYZ3 331 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ADAM10O14672 748 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 SPRY1O43609 319 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 TIMM8AO60220 97 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 IRF2P14316 349 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 OR3A4PP47883 348 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 EGR4Q05215 589 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 TSPO2Q5TGU0 170 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 FBXW9Q5XUX1 488 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 C6orf201Q7Z4U5 140 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 DPPA2Q7Z7J5 298 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 OR51F2Q8NH61 342 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 REEP6Q96HR9 211 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 SERTAD4Q9NUC0 356 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 LIPGQ9Y5X9 500 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ATP23Q9Y6H3 246 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 A0A1W2PPE2 198 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 SFT2D2O95562 160 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 RCC1P18754 421 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 C2orf68Q2NKX9 166 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 AMELYQ99218 206 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 SRXN1Q9BYN0 137 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ERRFI1Q9UJM3 462 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 THY1P04216 161 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ADRA2CP18825 462 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF133P52736 654 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 SUCLG1P53597 346 aaKnown RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 LDLRAD3Q86YD5 345 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 PIK3IP1Q96FE7 263 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF251Q9BRH9 671 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 RAB18Q9NP72 206 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 VSIG4Q9Y279 399 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 TNRC18O15417 2968 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 A0A1W2PPQ1 181 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 RAB27BO00194 218 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF32P17041 273 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 MPGP29372 298 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 RBP2P50120 134 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF83P51522 516 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 RBMS3Q6XE24 437 aaKnown RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ZSCAN4Q8NAM6 433 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ADPRHL1Q8NDY3 354 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 SNRNP40Q96DI7 357 aaKnown RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 TMPRSS5Q9H3S3 457 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 BCO1Q9HAY6 547 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 PLEKHA3Q9HB20 300 aa10.29□□□□□ -0.76
HDAC6-201ENST00000334136 ZNF275Q9NSD4 429 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-201ENST00000334136 DOCK7Q96N67 2140 aa10.28□□□□□ -0.76
HDAC6-201ENST00000334136 FAM157BP0CG42 384 aa10.28□□□□□ -0.76
HDAC6-201ENST00000334136 BTCP35070 178 aa10.28□□□□□ -0.76
HDAC6-201ENST00000334136 RPS23P62266 143 aaKnown RBP10.28□□□□□ -0.76
HDAC6-201ENST00000334136 HBG1P69891 147 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms