RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RBM11P57052 281 aaKnown RBP13.78□□□□□ -0.2
SHOX-201ENST00000334060 FGF12P61328 243 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 RPS27AP62979 156 aaKnown RBP13.78□□□□□ -0.2
SHOX-201ENST00000334060 PLAC9Q5JTB6 97 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 Q6P435 159 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 ZSCAN4Q8NAM6 433 aaPredicted RBP13.78□□□□□ -0.2
SHOX-201ENST00000334060 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 Q8NFD4 153 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 S100A13Q99584 98 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 TMEM59Q9BXS4 323 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 NLKQ9UBE8 527 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 DNAJB11Q9UBS4 358 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 MAB21L2Q9Y586 359 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 PPIAL4EA0A075B759 164 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 OOEPA6NGQ2 149 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 OR2AT4A6NND4 320 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 PPIAL4DF5H284 164 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 HLA-DQB1P01920 261 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 CSTBP04080 98 aaKnown RBP13.78□□□□□ -0.2
SHOX-201ENST00000334060 PPIAL4FP0DN26 164 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 TALDO1P37837 337 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 BTG1P62324 171 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 STUMQ69YW2 141 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 SAXO1Q8IYX7 474 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 TPRX1Q8N7U7 411 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 OR11L1Q8NGX0 322 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 LHFPL5Q8TAF8 219 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 IL36GQ9NZH8 169 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 SPATA2Q9UM82 520 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 KCNK7Q9Y2U2 307 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 PPIAL4AQ9Y536 164 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 NPTNQ9Y639 398 aa13.78□□□□□ -0.2
SHOX-201ENST00000334060 TRAV24A0A0B4J272 114 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 A0A0G2JMP0 313 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 TMEM82A0PJX8 343 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 LEUTXA8MZ59 168 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 RGS5O15539 181 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 OR2H2O95918 312 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 DNASE1P24855 282 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 GABRA2P47869 451 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 MZT1Q08AG7 82 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 ELP2Q6IA86 826 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 Q6ZPA2 131 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 DNM1P46Q6ZS02 220 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 C6orf201Q7Z4U5 140 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 WFDC11Q8NEX6 87 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 OR10Z1Q8NGY1 313 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 CHODLQ9H9P2 273 aa13.77□□□□□ -0.21
SHOX-201ENST00000334060 TRAV39A0A0B4J263 110 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 FOXI3A8MTJ6 420 aaPredicted RBP13.76□□□□□ -0.21
SHOX-201ENST00000334060 RAB27BO00194 218 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 TNFRSF13BO14836 293 aaPredicted RBP13.76□□□□□ -0.21
SHOX-201ENST00000334060 ORC5O43913 435 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 GTF2F2P13984 249 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 IRF2P14316 349 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 COL10A1Q03692 680 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 TEX36Q5VZQ5 186 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 OR51T1Q8NGJ9 327 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 ERGIC1Q969X5 290 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 GAFA1Q96PS6 74 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 NEDD4LQ96PU5 975 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 HDHD3Q9BSH5 251 aaPredicted RBP13.76□□□□□ -0.21
SHOX-201ENST00000334060 ATG5Q9H1Y0 275 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 IGHV4-61A0A0C4DH41 118 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 A0A1W2PQ09 198 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 OR7C1O76099 320 aaPredicted RBP13.76□□□□□ -0.21
SHOX-201ENST00000334060 HAND1O96004 215 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 CYB5AP00167 134 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 FCER2P06734 321 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 PAX1P15863 534 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 CDK2P24941 298 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 Q5BKY6 102 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 NKAPLQ5M9Q1 402 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 Q5PR19 223 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 C17orf107Q6ZR85 190 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 OR4M1Q8NGD0 313 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 C10orf105Q8TEF2 133 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 C12orf4Q9NQ89 552 aa13.76□□□□□ -0.21
SHOX-201ENST00000334060 LRRC30A6NM36 301 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 CEACAM18A8MTB9 384 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 LGALS8O00214 317 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 CTAG1AP78358 180 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 KCNG3Q8TAE7 436 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 ARHGAP5-AS1Q96IT6 56 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 PPA2Q9H2U2 334 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 RANBP3Q9H6Z4 567 aaPredicted RBP13.75□□□□□ -0.21
SHOX-201ENST00000334060 DLL4Q9NR61 685 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 ABRACLQ9P1F3 81 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 BOLA1Q9Y3E2 137 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 ZFHX3Q15911 3703 aa13.75□□□□□ -0.21
SHOX-201ENST00000334060 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 ACAA1P09110 424 aaPredicted RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 ZNF44P15621 663 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 GNB3P16520 340 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 PRDX2P32119 198 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 GPR6P46095 362 aaPredicted RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 ZNF146Q15072 292 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms