RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 GAPTQ8N292 157 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF784Q8NCA9 323 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ABHD5Q8WTS1 349 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 AQP10Q96PS8 301 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 CCL28Q9NRJ3 127 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 PAM16Q9Y3D7 125 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ANKRD36A6QL64 1941 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 WNK2Q9Y3S1 2297 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 OR1K1Q8NGR3 316 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 RFESDQ8TAC1 157 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 ACOT6Q3I5F7 207 aaPredicted RBP12.34□□□□□ -0.43
EPHB3-201ENST00000330394 PRR27Q6MZM9 219 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
EPHB3-201ENST00000330394 TIPARPQ7Z3E1 657 aaKnown RBP12.34□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 NBASA2RRP1 2371 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 LOC101059948A0A1B0GTJ6 334 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 TNFSF14O43557 240 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 RSPO4Q2I0M5 234 aaPredicted RBP12.34□□□□□ -0.43
EPHB3-201ENST00000330394 AGBL5Q8NDL9 886 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 PINX1Q96BK5 328 aaKnown RBP12.34□□□□□ -0.43
EPHB3-201ENST00000330394 SPACA9Q96E40 222 aaPredicted RBP12.34□□□□□ -0.43
EPHB3-201ENST00000330394 FOXB1Q99853 325 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 ELOVL1Q9BW60 279 aa12.34□□□□□ -0.43
EPHB3-201ENST00000330394 YBX2Q9Y2T7 364 aaKnown RBP12.34□□□□□ -0.43
EPHB3-201ENST00000330394 DUSP3P51452 185 aaPredicted RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 TIGITQ495A1 244 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 VAX1Q5SQQ9 334 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 ZDHHC23Q8IYP9 409 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 EIF4E3Q8N5X7 224 aaKnown RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 AQP3Q92482 292 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 GFI1Q99684 422 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 LIN7CQ9NUP9 197 aaKnown RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 BOKQ9UMX3 212 aaPredicted RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 LHX6Q9UPM6 363 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 ABCA1O95477 2261 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 TPPP2P59282 170 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 C1orf100Q5SVJ3 147 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 GPBAR1Q8TDU6 330 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 HLA-CQ95604 372 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 MYOTQ9UBF9 498 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 PITPNC1Q9UKF7 332 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 EP300Q09472 2414 aaPredicted RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 RBBP6Q7Z6E9 1792 aaKnown RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 DEDDO75618 318 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 CER1O95813 267 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 VDAC1P21796 283 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 DTYMKP23919 212 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 FABP6P51161 128 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 HNRNPA3P51991 378 aaKnown RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 CXorf66Q5JRM2 361 aaPredicted RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 PTCRAQ6ISU1 281 aaPredicted RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 MFRPQ9BY79 579 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 GPR27Q9NS67 375 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 FKBP11Q9NYL4 201 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 CACFD1Q9UGQ2 172 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
EPHB3-201ENST00000330394 DOCK4Q8N1I0 1966 aa12.33□□□□□ -0.44
EPHB3-201ENST00000330394 GAPDHP04406 335 aaKnown RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 ZNF708P17019 499 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 RPS4Y1P22090 263 aaKnown RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 ROM1Q03395 351 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 FZD5Q13467 585 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 NAT6Q93015 286 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 RAB40CQ96S21 281 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 GPX7Q96SL4 187 aaPredicted RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 ATP5SQ99766 215 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 GDF15Q99988 308 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 SLC7A10Q9NS82 523 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 IGLV1-36A0A0B4J1U3 117 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 LIPT2A6NK58 231 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 TIMM8AO60220 97 aaPredicted RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 HSBP1O75506 76 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 CDX1P47902 265 aaPredicted RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 RND3P61587 244 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 OR5I1Q13606 314 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 HABP2Q14520 560 aaPredicted RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 TMEM252Q8N6L7 170 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 PTX4Q96A99 478 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 NAT8BQ9UHF3 227 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 FSTP19883 344 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 CLDN23Q96B33 292 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 MSI2Q96DH6 328 aaKnown RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 TM4SF19Q96DZ7 209 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
EPHB3-201ENST00000330394 ARL2-SNX15V9GYD0 113 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 C20orf202A1L168 122 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 CLDN15P56746 228 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 EGR4Q05215 589 aa12.32□□□□□ -0.44
EPHB3-201ENST00000330394 OR10G4Q8NGN3 311 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms