RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 OR4S1Q8NGB4 309 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 PLPPR1Q8TBJ4 325 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 NEU4Q8WWR8 484 aaPredicted RBP12.76□□□□□ -0.37
PRPF3-201ENST00000324862 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 TMEM165Q9HC07 324 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 ARID1AO14497 2285 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
PRPF3-201ENST00000324862 PITPNAQ00169 270 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 TEX36Q5VZQ5 186 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 OR52W1Q6IF63 320 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 C16orf87Q6PH81 154 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 GDPD1Q8N9F7 314 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 PERPQ96FX8 193 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
PRPF3-201ENST00000324862 ITPR2Q14571 2701 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 IGKV1D-8A0A087WSZ0 117 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 ISPDA4D126 451 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 TMPRSS2O15393 492 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 UPK1BO75841 260 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 MELTFP08582 738 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 RANBP1P43487 201 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 EFNA4P52798 201 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 GNG2P59768 71 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 FAAP20Q6NZ36 180 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 FIP1L1Q6UN15 594 aaKnown RBP12.75□□□□□ -0.37
PRPF3-201ENST00000324862 GPX8Q8TED1 209 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 HSF4Q9ULV5 492 aa12.75□□□□□ -0.37
PRPF3-201ENST00000324862 GABARAPH6UMI1 98 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 PPIHO43447 177 aaKnown RBP12.74□□□□□ -0.37
PRPF3-201ENST00000324862 ZNF737O75373 536 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 GDNFP39905 211 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 BTG1P62324 171 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 AESQ08117 197 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 C1orf87Q8N0U7 546 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FCAMRQ8WWV6 532 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 BORCS5Q969J3 196 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 GAFA1Q96PS6 74 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 NUDT16L1Q9BRJ7 211 aaKnown RBP12.74□□□□□ -0.37
PRPF3-201ENST00000324862 TMEM246Q9BRR3 403 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A10PA6NDY2 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A18PA6NE21 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A16PA6NEW6 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A20PA6NIJ5 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A8PA6NJQ4 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A7PA6NKC0 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A22PA8MWA6 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A12PA8MX19 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A5PA8MXJ8 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A23PA8MXZ1 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 MCRIP1C9JLW8 97 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 LGALS8O00214 317 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 SCGNO76038 276 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 GSTP1P09211 210 aaKnown RBP12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A15PP0C7V4 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A13PP0C7W8 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A14PP0C7W9 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM90A24PP0C7X0 464 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 OR3A1P47881 315 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 FAM189A2Q15884 450 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 BAIAP2L2Q6UXY1 529 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 OR4K15Q8NH41 348 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 CMSS1Q9BQ75 279 aaKnown RBP12.74□□□□□ -0.37
PRPF3-201ENST00000324862 ST6GALNAC5Q9BVH7 336 aa12.74□□□□□ -0.37
PRPF3-201ENST00000324862 ZNF701Q9NV72 531 aaPredicted RBP12.74□□□□□ -0.37
PRPF3-201ENST00000324862 CTDSPLO15194 276 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 LMO1P25800 156 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRPF3-201ENST00000324862 EDDM3AQ14507 147 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 LINC00596Q86U02 117 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 LYSMD2Q8IV50 215 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 UBALD1Q8TB05 177 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 CCDC107Q8WV48 283 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 DCTN5Q9BTE1 182 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 ETAA1Q9NY74 926 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 CTSZQ9UBR2 303 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 TANC2Q9HCD6 1990 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 LPLP06858 475 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 MUC1P15941 1255 aaPredicted RBP12.73□□□□□ -0.37
PRPF3-201ENST00000324862 HLA-DMAP28067 261 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 ZNF788Q6ZQV5 615 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 DNM1P46Q6ZS02 220 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 OR4D10Q8NGI6 311 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 COQ2Q96H96 371 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 CCDC32Q9BV29 185 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 DLL4Q9NR61 685 aa12.73□□□□□ -0.37
PRPF3-201ENST00000324862 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
PRPF3-201ENST00000324862 TRAV38-1A0A0B4J264 116 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 SERPINE3A8MV23 424 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 IGHV2-70P01814 119 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 RCC1P18754 421 aaPredicted RBP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 SSTR2P30874 369 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 ATP5J2P56134 94 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 DCTN2Q13561 401 aaKnown RBP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 GRK1Q15835 563 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 TRIQKQ629K1 86 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 ZNF57Q68EA5 555 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms