RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 COL7A1Q02388 2944 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 IGKV1-27A0A075B6S5 117 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 hADV38S2A0JD32 116 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 TMEM82A0PJX8 343 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 F2RL2O00254 374 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 PEX14O75381 377 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 CCDC159P0C7I6 412 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 IGLL1P15814 213 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 JUNBP17275 347 aaPredicted RBP11.39□□□□□ -0.59
RPP40-201ENST00000319533 MYL12AP19105 171 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 PRKACBP22694 351 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 DCKP27707 260 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 RBP2P50120 134 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 EDDM3BP56851 147 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 DYNC1I2Q13409 638 aaKnown RBP11.39□□□□□ -0.59
RPP40-201ENST00000319533 TMEM95Q3KNT9 176 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 TCTEX1D4Q5JR98 221 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 FGGYQ96C11 551 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 CEP19Q96LK0 163 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 NR1H4Q96RI1 486 aaPredicted RBP11.39□□□□□ -0.59
RPP40-201ENST00000319533 JAM3Q9BX67 310 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 COMMD4Q9H0A8 199 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 ISG20L2Q9H9L3 353 aaKnown RBP11.39□□□□□ -0.59
RPP40-201ENST00000319533 FGF20Q9NP95 211 aaPredicted RBP11.39□□□□□ -0.59
RPP40-201ENST00000319533 HILPDAQ9Y5L2 63 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 LINC00312Q9Y6C7 94 aa11.39□□□□□ -0.59
RPP40-201ENST00000319533 IGHV2-26A0A0B4J1V2 119 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 MEX3AA1L020 520 aaKnown RBP11.38□□□□□ -0.59
RPP40-201ENST00000319533 TMEM212A6NML5 194 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 OR4C45A6NMZ5 311 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 K7EIL1 84 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 CYB5AP00167 134 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 SMIM18P0DKX4 95 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 CD33P20138 364 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 ATP1B3P54709 279 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 VAX1Q5SQQ9 334 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 C6orf141Q5SZD1 244 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 TMPRSS11AQ6ZMR5 421 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 UTS2BQ765I0 119 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 SPSB1Q96BD6 273 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 ADAT3Q96EY9 351 aaPredicted RBP11.38□□□□□ -0.59
RPP40-201ENST00000319533 TMEM133Q9H2Q1 129 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 LIN7BQ9HAP6 207 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 NEK6Q9HC98 313 aa11.38□□□□□ -0.59
RPP40-201ENST00000319533 PAK1IP1Q9NWT1 392 aaPredicted RBP11.38□□□□□ -0.59
RPP40-201ENST00000319533 CHCHD3Q9NX63 227 aaKnown RBP11.38□□□□□ -0.59
RPP40-201ENST00000319533 TRBV2A0A0J9YWF9 115 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 H3BUI4 141 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 LIMS3P0CW19 117 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 LIMS4P0CW20 117 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 ATF1P18846 271 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 MTCP1P56278 107 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 LHFPL2Q6ZUX7 228 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 OR52N4Q8NGI2 321 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 OR4P4Q8NGL7 312 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 OR5AK2Q8NH90 309 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 TSEN15Q8WW01 171 aaKnown RBP11.37□□□□□ -0.59
RPP40-201ENST00000319533 OPALINQ96PE5 141 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 ZNF649Q9BS31 505 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 CLEC7AQ9BXN2 247 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 DIMT1Q9UNQ2 313 aaKnown RBP11.37□□□□□ -0.59
RPP40-201ENST00000319533 DHDHQ9UQ10 334 aa11.37□□□□□ -0.59
RPP40-201ENST00000319533 EXOSC1Q9Y3B2 195 aaKnown RBP11.37□□□□□ -0.59
RPP40-201ENST00000319533 TSSC4Q9Y5U2 329 aaPredicted RBP11.37□□□□□ -0.59
RPP40-201ENST00000319533 TENM3Q9P273 2699 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 ZFPL1O95159 310 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 MPIG6BO95866 241 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 HTR1DP28221 377 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 ERP29P30040 261 aaKnown RBP11.36□□□□□ -0.59
RPP40-201ENST00000319533 POU3F4P49335 361 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 ZNF146Q15072 292 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 ARSJQ5FYB0 599 aaPredicted RBP11.36□□□□□ -0.59
RPP40-201ENST00000319533 SLC25A26Q70HW3 274 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 Q8IYB0 196 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 OR51A4Q8NGJ6 313 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 OR10AC1Q8NH08 325 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 NDNFQ8TB73 568 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 SLAMF9Q96A28 289 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 TMEM80Q96HE8 168 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 RCC1LQ96I51 464 aaKnown RBP11.36□□□□□ -0.59
RPP40-201ENST00000319533 DPM3Q9P2X0 92 aa11.36□□□□□ -0.59
RPP40-201ENST00000319533 UBE2J1Q9Y385 318 aaPredicted RBP11.36□□□□□ -0.59
RPP40-201ENST00000319533 IGKV1-9A0A0C4DH69 117 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 A0A1W2PRX2 142 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 E9PI62 339 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 MGST3O14880 152 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 PSPNO60542 156 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 MMP23AO75900 390 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 INMTO95050 263 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 DUS4LO95620 317 aaKnown RBP11.35□□□□□ -0.59
RPP40-201ENST00000319533 HAND1O96004 215 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 PF4V1P10720 104 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 CRHBPP24387 322 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 ETV1P50549 477 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 SLC35A2P78381 396 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 BDH1Q02338 343 aa11.35□□□□□ -0.59
RPP40-201ENST00000319533 EDDM3AQ14507 147 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms