RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 P2RY1P47900 373 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 C17orf67Q0P5P2 114 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 HEPN1Q6WQI6 88 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 SLC25A26Q70HW3 274 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 DOK3Q7L591 496 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 RDH5Q92781 318 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF845Q96IR2 970 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 HDGFL3Q9Y3E1 203 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 MSTNO14793 375 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 TSPAN2O60636 221 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 IFNA10P01566 189 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 HOXA5P20719 270 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 HMGN3Q15651 99 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 PLCXD3Q63HM9 321 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 LIPT2A6NK58 231 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 TNFRSF10CO14798 259 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 SRSF10O75494 262 aaKnown RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 TRAPPC6AO75865 159 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 PGA3P0DJD8 388 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 EN2P19622 333 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 FAM3AP98173 230 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 SRSF4Q08170 494 aaKnown RBP12.36□□□□□ -0.43
PABPC1-201ENST00000318607 OR8G1Q15617 311 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 ANKRD39Q53RE8 183 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 ETFRF1Q6IPR1 90 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 SVIPQ8NHG7 77 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 TMEM171Q8WVE6 324 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 LYZL4Q96KX0 146 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 PLEKHA2Q9HB19 425 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 NECAP2Q9NVZ3 263 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 CA14Q9ULX7 337 aa12.36□□□□□ -0.43
PABPC1-201ENST00000318607 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 PPIHO43447 177 aaKnown RBP12.35□□□□□ -0.43
PABPC1-201ENST00000318607 TLX3O43711 291 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-201ENST00000318607 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 CD200P41217 278 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 TGFBR3Q03167 851 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 COTL1Q14019 142 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 ELOBQ15370 118 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF66Q6ZN08 573 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 ULBP2Q9BZM5 246 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 KCNS2Q9ULS6 477 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 A0A1B0GUS0 222 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 FTCDNL1E5RQL4 147 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 THBS4P35443 961 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 SRYQ05066 204 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 SYT3Q9BQG1 590 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 TMEM204Q9BSN7 226 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 CHST5Q9GZS9 411 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 METTL9Q9H1A3 318 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 VSIRQ9H7M9 311 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 A0A096LPE4 126 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 FAM157AC9JC47 383 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-201ENST00000318607 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
PABPC1-201ENST00000318607 NPBWR2P48146 333 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 PRSS8Q16651 343 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 COMMD1Q8N668 190 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 OR10AD1Q8NGE0 317 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 TVP23CQ96ET8 276 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 CBLN4Q9NTU7 201 aa12.35□□□□□ -0.43
PABPC1-201ENST00000318607 MUC3AQ02505 3323 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 TCAPO15273 167 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 NPIPB7O75200 414 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 CLN3Q13286 438 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 SPANXN5Q5MJ07 72 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 PHYHD1Q5SRE7 291 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF468Q5VIY5 522 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-201ENST00000318607 MUCL1Q96DR8 90 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 RNF122Q9H9V4 155 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 SLC7A10Q9NS82 523 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 RBP2P50120 134 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 LSM6P62312 80 aaKnown RBP12.34□□□□□ -0.43
PABPC1-201ENST00000318607 THEM4Q5T1C6 240 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF574Q6ZN55 896 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-201ENST00000318607 NOXO1Q8NFA2 376 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF488Q96MN9 340 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 DEFB126Q9BYW3 111 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 WNT5BQ9H1J7 359 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 CRYM-AS1A6NIL9 109 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 GATCO43716 136 aaKnown RBP12.34□□□□□ -0.43
PABPC1-201ENST00000318607 SSTP61278 116 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 YPEL5P62699 121 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 HSPB2Q16082 182 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 ARHGEF39Q8N4T4 335 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 SCGB1C1Q8TD33 95 aa12.34□□□□□ -0.43
PABPC1-201ENST00000318607 ABHD5Q8WTS1 349 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms