RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 A8MWP6 167 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 H3BMH7 237 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 TMEM50AO95807 157 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 AMBPP02760 352 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 ECI1P42126 302 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 ARL4DP49703 201 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 DCAF7P61962 342 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 YPEL5P62699 121 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF695Q8IW36 515 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 Q96M66 194 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 SIRT7Q9NRC8 400 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 RALGAPA1Q6GYQ0 2036 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 SPTY2D1-AS1A0A0U1RR47 76 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 CLDN34H7C241 214 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 HSPB1P04792 205 aaKnown RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 FGF7P21781 194 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 ERVS71-1P61550 626 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 P2RY6Q15077 328 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 IZUMO4Q1ZYL8 232 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 DBX2Q6ZNG2 339 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 OR4D5Q8NGN0 318 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 OR4X1Q8NH49 305 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 SYT3Q9BQG1 590 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 C2orf88Q9BSF0 95 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 RSG1Q9BU20 258 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 DDA1Q9BW61 102 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 ALKBH4Q9NXW9 302 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 CABIN1Q9Y6J0 2220 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 A0A1B0GW64 132 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 DHRS3O75911 302 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 GUCA1AP43080 201 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 TNFRSF4P43489 277 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 CLDN17P56750 224 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 ARL6IP1Q15041 203 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 ADIRFQ15847 76 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 SNAI3Q3KNW1 292 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF506Q5JVG8 444 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 SLC35E3Q7Z769 313 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 RLN3Q8WXF3 142 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 PHF7Q9BWX1 381 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 LAMP3Q9UQV4 416 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 MMACHCQ9Y4U1 282 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 COL4A2P08572 1712 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 IGHV3-15A0A0B4J1V0 119 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 C3orf85A0A1B0GTC6 90 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 A0A1W2PR80 420 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 HSPB6O14558 160 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 RRP8O43159 456 aaKnown RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 TRAF3IP2O43734 574 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 PITX3O75364 302 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 BTF3P20290 206 aaKnown RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 FBLP22087 321 aaKnown RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 GNRHRP30968 328 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 GALNSP34059 522 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF41P51814 821 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 RNF4P78317 190 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 COL10A1Q03692 680 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 TMEM267Q0VDI3 215 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-202ENST00000318266 CLN3Q13286 438 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 LMX1AQ8TE12 382 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 TM2D1Q9BX74 207 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 VSIRQ9H7M9 311 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 PLEKHF2Q9H8W4 249 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 CBLN4Q9NTU7 201 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 PLEK2Q9NYT0 353 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 CELSR3Q9NYQ7 3312 aa8.37□□□□□ -1.07
PTPRA-202ENST00000318266 XKRY2A2RUG3 117 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 ANKUB1A6NFN9 424 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 CEBPZOSA8MTT3 80 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 HMGB3O15347 200 aaKnown RBP8.36□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF133P52736 654 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-202ENST00000318266 TLE4Q04727 773 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 C17orf67Q0P5P2 114 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 TCF15Q12870 199 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 JOSD1Q15040 202 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-202ENST00000318266 DEFB133Q30KQ1 61 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 OR13D1Q8NGV5 346 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 NEU1Q99519 415 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 RBM24Q9BX46 236 aaKnown RBP8.36□□□□□ -1.07
PTPRA-202ENST00000318266 MRPL37Q9BZE1 423 aaKnown RBP8.36□□□□□ -1.07
PTPRA-202ENST00000318266 METTL9Q9H1A3 318 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 SMDT1Q9H4I9 107 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF442Q9H7R0 627 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 P4HTMQ9NXG6 502 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 OBP2AQ9NY56 170 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 PITPNC1Q9UKF7 332 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 ARHGAP21Q5T5U3 1957 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 ADAMTS9Q9P2N4 1935 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 CHST1O43916 411 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 IGHV4-34P06331 123 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 CCL1P22362 96 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 RPS18P62269 152 aaKnown RBP8.36□□□□□ -1.07
PTPRA-202ENST00000318266 PRSS8Q16651 343 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 FAM90A2PQ658T7 463 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 D2HGDHQ8N465 521 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 OR5T1Q8NG75 326 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 OIT3Q8WWZ8 545 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 ST8SIA1Q92185 356 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms