RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 C1orf100Q5SVJ3 147 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 DHRS7BQ6IAN0 325 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 ADAM5Q6NVV9 412 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 VWA1Q6PCB0 445 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 CALHM1Q8IU99 346 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 NKAIN3Q8N8D7 197 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 CSNK2A3Q8NEV1 391 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 OR13G1Q8NGZ3 307 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 TOMM40LQ969M1 308 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 RAB3CQ96E17 227 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 C1orf147Q96MC9 270 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 HS3ST6Q96QI5 342 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 TAF9BQ9HBM6 251 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 RCC2Q9P258 522 aaKnown RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 LPAR3Q9UBY5 353 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 STARD10Q9Y365 291 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 KLF2Q9Y5W3 355 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 MAP1AP78559 2803 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 TEX13DA0A0J9YY54 714 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 A0A1W2PPE2 198 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 FGF16O43320 207 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 TNFSF12O43508 249 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 IL2RAP01589 272 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 CST2P09228 141 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 MMP7P09237 267 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 OTX1P32242 354 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 OPRM1P35372 400 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 OR3A2P47893 321 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 NPBWR2P48146 333 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 NUBP1P53384 320 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 FAM3AP98173 230 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 FABP9Q0Z7S8 132 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 SMCO1Q147U7 214 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 ANKRD39Q53RE8 183 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 FAM24BQ8N5W8 94 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 ERGIC1Q969X5 290 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 GPHA2Q96T91 129 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 IL36RNQ9UBH0 155 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 GHRLQ9UBU3 117 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 RAB22AQ9UL26 194 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 FBXO7Q9Y3I1 522 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 LOC390937A0A1W2PQ73 354 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 RAB19A4D1S5 217 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 TTLL8A6PVC2 850 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 COLCA2A8K830 154 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 F8VVB4 439 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 F8VWA3 439 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 NRASP01111 189 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 OR13C7P0DN81 318 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 IDH3GP51553 393 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-202ENST00000315962 GPM6AP51674 278 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 FXYD4P59646 89 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 RELQ04864 619 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-202ENST00000315962 ECH1Q13011 328 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 IAH1Q2TAA2 248 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-202ENST00000315962 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 FAM76BQ5HYJ3 339 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 PLCXD3Q63HM9 321 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 LPCAT3Q6P1A2 487 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 OR56B2PQ8NGI1 322 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 OR5H2Q8NGV7 314 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 TERB2Q8NHR7 220 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 CD300LFQ8TDQ1 290 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 PHYHIPLQ96FC7 376 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF488Q96MN9 340 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 FAAP24Q9BTP7 215 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 SCNM1Q9BWG6 230 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 SH3BGRL3Q9H299 93 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 MMP26Q9NRE1 261 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 PARPBPQ9NWS1 579 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 FBXL17Q9UF56 701 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 MED12LQ86YW9 2145 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 OR6C6A6NF89 314 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 DNPH1O43598 174 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 APOC1P02654 83 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 FABP1P07148 127 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF44P15621 663 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF14P17017 642 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-202ENST00000315962 HIST1H3AP68431 136 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 AWAT1Q58HT5 328 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 HIST2H3PS2Q5TEC6 136 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF529Q6P280 563 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 HIST2H3AQ71DI3 136 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 HOGA1Q86XE5 327 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 HSD17B11Q8NBQ5 300 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 SLC30A7Q8NEW0 376 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 RTBDNQ9BSG5 229 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-202ENST00000315962 BCL2L14Q9BZR8 327 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 CHST5Q9GZS9 411 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
TRIM55-202ENST00000315962 MOB1AQ9H8S9 216 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 SLC2A8Q9NY64 477 aa6.55□□□□□ -1.36
TRIM55-202ENST00000315962 MRPS18CQ9Y3D5 142 aaKnown RBP6.55□□□□□ -1.36
TRIM55-202ENST00000315962 KMT2EQ8IZD2 1858 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 IGKV1-12A0A0C4DH73 117 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 GEMIN2O14893 280 aaKnown RBP6.54□□□□□ -1.36
TRIM55-202ENST00000315962 IGKV1D-12P01611 117 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 CSTBP04080 98 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms