RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SRD5A3Q9H8P0 318 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 PHF3Q92576 2039 aaKnown RBP13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SPRY3O43610 288 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 OR5AC1P0C628 307 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SRFP11831 508 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 WDR74Q6RFH5 385 aaPredicted RBP13.8□□□□□ -0.2
HCFC1-201ENST00000310441 ZNF576Q9H609 170 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SPRY1O43609 319 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-201ENST00000310441 GNG7O60262 68 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 TGIF2LYQ8IUE0 185 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 A0A0B4J2E0 115 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 A0A1B0GX12 115 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 EPPINO95925 133 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 NOVP48745 357 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 SLC25A30Q5SVS4 291 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 PRSS50Q9UI38 385 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 KCNMB2Q9Y691 235 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 ALG1L2C9J202 215 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 LPAR6P43657 344 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 EMDP50402 254 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 DLK1P80370 383 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 SIGIRRQ6IA17 410 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 PAQR6Q6TCH4 344 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 ERRFI1Q9UJM3 462 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-201ENST00000310441 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-201ENST00000310441 K7ESM1 405 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 TNFSF15O95150 251 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 ONECUT2O95948 504 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 HOXA6P31267 233 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 ZBTB34Q8NCN2 500 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 MCHR2Q969V1 340 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 CXXC4Q9H2H0 198 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 MPC1Q9Y5U8 109 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 RHBDL1O75783 438 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 SNRPEP62304 92 aaKnown RBP13.79□□□□□ -0.2
HCFC1-201ENST00000310441 OR4C12Q96R67 309 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 NPTNQ9Y639 398 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 TMEM202A6NGA9 273 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 GEMIN2O14893 280 aaKnown RBP13.79□□□□□ -0.2
HCFC1-201ENST00000310441 SEMG1P04279 462 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 ZNF738Q8NE65 137 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 IGHV3-20A0A0C4DH32 117 aa13.79□□□□□ -0.2
HCFC1-201ENST00000310441 INPP5JQ15735 1006 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-201ENST00000310441 CD82P27701 267 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 IL22RA2Q969J5 263 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 PPP1R1AQ13522 171 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 PHF7Q9BWX1 381 aaPredicted RBP13.78□□□□□ -0.2
HCFC1-201ENST00000310441 SLC25A37Q9NYZ2 338 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 LYZL6O75951 148 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 ORM2P19652 201 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 TTC32Q5I0X7 151 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 MRGPRGQ86SM5 289 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 MRPL13Q9BYD1 178 aaKnown RBP13.78□□□□□ -0.2
HCFC1-201ENST00000310441 PSME4Q14997 1843 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 UBE2L6O14933 153 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 ADAT3Q96EY9 351 aaPredicted RBP13.78□□□□□ -0.2
HCFC1-201ENST00000310441 STARD10Q9Y365 291 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 CD300LDQ6UXZ3 194 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 TMEM70Q9BUB7 260 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 PSG11Q9UQ72 335 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 CXCL13O43927 109 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 DYNLT3P51808 116 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 LIMK1P53667 647 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 TNFAIP6P98066 277 aaPredicted RBP13.78□□□□□ -0.2
HCFC1-201ENST00000310441 JOSD1Q15040 202 aaPredicted RBP13.78□□□□□ -0.2
HCFC1-201ENST00000310441 TM4SF19Q96DZ7 209 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 SNX22Q96L94 193 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 PAPPA2Q9BXP8 1791 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 F2RL2O00254 374 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 LMX1BO60663 402 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 SLC25A35Q3KQZ1 300 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 OR8D4Q8NGM9 314 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 Q8WTZ3 238 aa13.78□□□□□ -0.2
HCFC1-201ENST00000310441 TINAGL1Q9GZM7 467 aaPredicted RBP13.78□□□□□ -0.2
HCFC1-201ENST00000310441 CTDSPLO15194 276 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 PCMT1P22061 227 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 CCDC144NLQ6NUI1 221 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 NARFLQ9H6Q4 476 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 COA4Q9NYJ1 87 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 MOB4Q9Y3A3 225 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 A0A1B0GU03 582 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 CTSDP07339 412 aaPredicted RBP13.77□□□□□ -0.2
HCFC1-201ENST00000310441 TAS2R60P59551 318 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 SPATA46Q5T0L3 261 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 FAM24BQ8N5W8 94 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 FGF22Q9HCT0 170 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 MMP25Q9NPA2 562 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 SLC52A3Q9NQ40 469 aa13.77□□□□□ -0.2
HCFC1-201ENST00000310441 ID4P47928 161 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 DEFB109BQ30KR1 87 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 DYNLRB2Q8TF09 96 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 ZNF253O75346 499 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 SDK2Q58EX2 2172 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 IGHV3-15A0A0B4J1V0 119 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 SUCLG1P53597 346 aaKnown RBP13.77□□□□□ -0.21
HCFC1-201ENST00000310441 NRXN3Q9Y4C0 1643 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 CDX4O14627 284 aaPredicted RBP13.77□□□□□ -0.21
HCFC1-201ENST00000310441 C10orf113Q5VZT2 155 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 MUC20Q8N307 709 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms