RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CHRFAM7AQ494W8 412 aa18.97■□□□□ 0.63
IRF3-201ENST00000309877 FAM90A1Q86YD7 464 aa18.97■□□□□ 0.63
IRF3-201ENST00000309877 OR5H2Q8NGV7 314 aa18.97■□□□□ 0.63
IRF3-201ENST00000309877 MARVELD1Q9BSK0 173 aa18.97■□□□□ 0.63
IRF3-201ENST00000309877 NUDT15Q9NV35 164 aa18.97■□□□□ 0.63
IRF3-201ENST00000309877 TRAV6A0A075B6T7 132 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 RFPL4AA6NLU0 287 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 RFPL4AL1F8VTS6 287 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 LHBP01229 141 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 RBMXP38159 391 aaKnown RBP18.96■□□□□ 0.63
IRF3-201ENST00000309877 OR3A3P47888 321 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 CEBPDP49716 269 aaPredicted RBP18.96■□□□□ 0.63
IRF3-201ENST00000309877 MICBQ29980 383 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 BTN2A1Q7KYR7 527 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 HPS1Q92902 700 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 TREM2Q9NZC2 230 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 SCP2D1Q9UJQ7 156 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 WIPI2Q9Y4P8 454 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 ZFYVE26Q68DK2 2539 aa18.96■□□□□ 0.63
IRF3-201ENST00000309877 LRRC30A6NM36 301 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 PYCARD-AS1I3L0S3 204 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 MEX3BQ6ZN04 569 aaKnown RBP18.95■□□□□ 0.62
IRF3-201ENST00000309877 SLC6A7Q99884 636 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 RIMS4Q9H426 269 aaPredicted RBP18.95■□□□□ 0.62
IRF3-201ENST00000309877 CYB5R3P00387 301 aaPredicted RBP18.95■□□□□ 0.62
IRF3-201ENST00000309877 H2AFB2P0C5Z0 115 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 MDH2P40926 338 aaKnown RBP18.95■□□□□ 0.62
IRF3-201ENST00000309877 ARPC4P59998 168 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 SCGB2B2Q4G0G5 96 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 OR5AP2Q8NGF4 316 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 OR5T2Q8NGG2 359 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 ZNF286AQ9HBT8 521 aa18.95■□□□□ 0.62
IRF3-201ENST00000309877 FUOMA2VDF0 154 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.94■□□□□ 0.62
IRF3-201ENST00000309877 IFNL4K9M1U5 179 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 NDUFB6O95139 128 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 ZNF735P0CB33 412 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 RAB25P57735 213 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 RBMS2Q15434 407 aaKnown RBP18.94■□□□□ 0.62
IRF3-201ENST00000309877 VAX1Q5SQQ9 334 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 PRRT1Q99946 306 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 GINS4Q9BRT9 223 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 C20orf85Q9H1P6 137 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 ANXA10Q9UJ72 324 aa18.94■□□□□ 0.62
IRF3-201ENST00000309877 ICE1Q9Y2F5 2266 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 IGHV3OR15-7A0A075B7D8 119 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 OR2AT4A6NND4 320 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 NAPSAO96009 420 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 PSG2P11465 335 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 LMO1P25800 156 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 PRDX2P32119 198 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 CD80P33681 288 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 BCAP31P51572 246 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 BTG1P62324 171 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 AGAP6Q5VW22 663 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 IDO2Q6ZQW0 420 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 VRK1Q99986 396 aaPredicted RBP18.93■□□□□ 0.62
IRF3-201ENST00000309877 PPA2Q9H2U2 334 aa18.93■□□□□ 0.62
IRF3-201ENST00000309877 IGKV1D-8A0A087WSZ0 117 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 DHFRP00374 187 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 TSPAN5P62079 268 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 COL10A1Q03692 680 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 SHEQ5VZ18 495 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 TMEM165Q9HC07 324 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 CBLN4Q9NTU7 201 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 ING3Q9NXR8 418 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 FBXO9Q9UK97 447 aaPredicted RBP18.92■□□□□ 0.62
IRF3-201ENST00000309877 CHD3Q12873 2000 aaKnown RBP18.92■□□□□ 0.62
IRF3-201ENST00000309877 H7C1Q1 480 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 GABRA2P47869 451 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 CDK10Q15131 360 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 ZMYND11Q15326 602 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 FAM201AQ5SY85 155 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 TMEM17Q86X19 198 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 C1orf87Q8N0U7 546 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 ARRDC1Q8N5I2 433 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 CD177Q8N6Q3 437 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 SLC2A8Q9NY64 477 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 EHFQ9NZC4 300 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 FLVCR2Q9UPI3 526 aa18.92■□□□□ 0.62
IRF3-201ENST00000309877 KLF2Q9Y5W3 355 aaPredicted RBP18.92■□□□□ 0.62
IRF3-201ENST00000309877 A6NNC1 897 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 ARPC1BO15143 372 aaKnown RBP18.91■□□□□ 0.62
IRF3-201ENST00000309877 PFDN1O60925 122 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 TFF1P04155 84 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 RNF224P0DH78 156 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 PPOXP50336 477 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 ATXN7L3Q14CW9 347 aaPredicted RBP18.91■□□□□ 0.62
IRF3-201ENST00000309877 SRSF7Q16629 238 aaKnown RBP eCLIP18.91■□□□□ 0.62
IRF3-201ENST00000309877 TATDN3Q17R31 274 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 TGIF2LYQ8IUE0 185 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 CADM3Q8N126 398 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 MRPL30Q8TCC3 161 aaKnown RBP18.91■□□□□ 0.62
IRF3-201ENST00000309877 SLC25A21Q9BQT8 299 aaPredicted RBP18.91■□□□□ 0.62
IRF3-201ENST00000309877 SEBOXQ9HB31 216 aaPredicted RBP18.91■□□□□ 0.62
IRF3-201ENST00000309877 Q9N2K0 584 aa18.91■□□□□ 0.62
IRF3-201ENST00000309877 IGKV1D-17A0A075B6S4 117 aa18.9■□□□□ 0.62
IRF3-201ENST00000309877 SDCBPO00560 298 aaPredicted RBP18.9■□□□□ 0.62
IRF3-201ENST00000309877 PSPNO60542 156 aa18.9■□□□□ 0.62
IRF3-201ENST00000309877 RAG2P55895 527 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms