RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 RPL5P46777 297 aaKnown RBP18.46■□□□□ 0.55
HOXD4-201ENST00000306324 OR3A1P47881 315 aa18.46■□□□□ 0.55
HOXD4-201ENST00000306324 EDDM3BP56851 147 aa18.46■□□□□ 0.55
HOXD4-201ENST00000306324 MPV17LQ2QL34 196 aa18.46■□□□□ 0.55
HOXD4-201ENST00000306324 ATAD3CQ5T2N8 411 aa18.46■□□□□ 0.55
HOXD4-201ENST00000306324 MRI1Q9BV20 369 aa18.46■□□□□ 0.55
HOXD4-201ENST00000306324 TMEM59Q9BXS4 323 aa18.46■□□□□ 0.55
HOXD4-201ENST00000306324 NAA50Q9GZZ1 169 aaKnown RBP18.46■□□□□ 0.55
HOXD4-201ENST00000306324 SLC2A2P11168 524 aaPredicted RBP18.46■□□□□ 0.54
HOXD4-201ENST00000306324 RANBP1P43487 201 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 RPL31P62899 125 aaKnown RBP18.46■□□□□ 0.54
HOXD4-201ENST00000306324 UNC119Q13432 240 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 C2orf76Q3KRA6 126 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 PAN3Q58A45 887 aaKnown RBP18.46■□□□□ 0.54
HOXD4-201ENST00000306324 SLC16A12Q6ZSM3 486 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 ANKRD13BQ86YJ7 626 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 LURAP1LQ8IV03 231 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 FAM185AQ8N0U4 392 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 Q96M66 194 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 TMPRSS13Q9BYE2 586 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 LIN7BQ9HAP6 207 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 C19orf12Q9NSK7 152 aa18.46■□□□□ 0.54
HOXD4-201ENST00000306324 TRBV23-1A0A0A0MS06 115 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 TRAV24A0A0B4J272 114 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 TMEM14DPA8MWL7 114 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 J3QLI3 93 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 MGST3O14880 152 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 LIPFP07098 398 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 VBP1P61758 197 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 NCS1P62166 190 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 QRFPP83859 136 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 ATXN7L3Q14CW9 347 aaPredicted RBP18.45■□□□□ 0.54
HOXD4-201ENST00000306324 FAM120AOSQ5T036 256 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 SFXN4Q6P4A7 337 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 OR2W3Q7Z3T1 314 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 BPIFB2Q8N4F0 458 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 C8orf46Q8TAG6 207 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 ING3Q9NXR8 418 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 ONECUT1Q9UBC0 465 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 DAPK2Q9UIK4 370 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 AUP1Q9Y679 476 aa18.45■□□□□ 0.54
HOXD4-201ENST00000306324 FN1P02751 2386 aaKnown RBP18.44■□□□□ 0.54
HOXD4-201ENST00000306324 A0A0B4J203 849 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 CFPP27918 469 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 RPS27AP62979 156 aaKnown RBP18.44■□□□□ 0.54
HOXD4-201ENST00000306324 PAX8Q06710 450 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 IL17RELQ6ZVW7 336 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 TPRX1Q8N7U7 411 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 SUMF2Q8NBJ7 301 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 LY6G5BQ8NDX9 201 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 IFT22Q9H7X7 185 aa18.44■□□□□ 0.54
HOXD4-201ENST00000306324 NIPBLQ6KC79 2804 aaeCLIP18.43■□□□□ 0.54
HOXD4-201ENST00000306324 AVPP01185 164 aa18.43■□□□□ 0.54
HOXD4-201ENST00000306324 SERPINB10P48595 397 aa18.43■□□□□ 0.54
HOXD4-201ENST00000306324 ARF6P62330 175 aa18.43■□□□□ 0.54
HOXD4-201ENST00000306324 AESQ08117 197 aa18.43■□□□□ 0.54
HOXD4-201ENST00000306324 DPCDQ9BVM2 203 aaPredicted RBP18.43■□□□□ 0.54
HOXD4-201ENST00000306324 TMEM160Q9NX00 188 aa18.43■□□□□ 0.54
HOXD4-201ENST00000306324 TMEM272A0A1B0GTI8 110 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 MEX3AA1L020 520 aaKnown RBP18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A10PA6NDY2 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A18PA6NE21 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A16PA6NEW6 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A20PA6NIJ5 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A8PA6NJQ4 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A7PA6NKC0 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A22PA8MWA6 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A12PA8MX19 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A5PA8MXJ8 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A23PA8MXZ1 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 GABARAPO95166 117 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A15PP0C7V4 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A13PP0C7W8 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A14PP0C7W9 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 FAM90A24PP0C7X0 464 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 HNF1AP20823 631 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 BRICD5Q6PL45 260 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 CLVS1Q8IUQ0 354 aaPredicted RBP18.42■□□□□ 0.54
HOXD4-201ENST00000306324 NEK7Q8TDX7 302 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 NICN1Q9BSH3 213 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 URM1Q9BTM9 101 aaKnown RBP18.42■□□□□ 0.54
HOXD4-201ENST00000306324 SPACA1Q9HBV2 294 aa18.42■□□□□ 0.54
HOXD4-201ENST00000306324 CSN2P05814 226 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 RPS19P39019 145 aaKnown RBP18.41■□□□□ 0.54
HOXD4-201ENST00000306324 CTF1Q16619 201 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 KRBOX4Q5JUW0 171 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 IDNKQ5T6J7 187 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 METTL11BQ5VVY1 283 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 TMEM200BQ69YZ2 307 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 RAB12Q6IQ22 244 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 PCGF1Q9BSM1 259 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 OPN4Q9UHM6 478 aa18.41■□□□□ 0.54
HOXD4-201ENST00000306324 FUOMA2VDF0 154 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 IL1AP01583 271 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 P2RX3P56373 397 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 PLA2G7Q13093 441 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 NKAPLQ5M9Q1 402 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 C1orf229Q6ZS94 237 aaPredicted RBP18.4■□□□□ 0.54
HOXD4-201ENST00000306324 COQ2Q96H96 371 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 TM2D1Q9BX74 207 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms