RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PDCD6O75340 191 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 WNT2P09544 360 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 CHATP28329 748 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 TMEM50BP56557 158 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 RAB12Q6IQ22 244 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 BPIFB2Q8N4F0 458 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 NEIL1Q96FI4 390 aaPredicted RBP22.56■■□□□ 1.2
HDAC3-201ENST00000305264 POM121Q96HA1 1249 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 SHARPINQ9H0F6 387 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 DOCK11Q5JSL3 2073 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 RNF223E7ERA6 249 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 APOA1P02647 267 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 OR3A1P47881 315 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 PAN3Q58A45 887 aaKnown RBP22.56■■□□□ 1.2
HDAC3-201ENST00000305264 PLAC9Q5JTB6 97 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 ZNF841Q6ZN19 808 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 C6orf201Q7Z4U5 140 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 DTX3Q8N9I9 347 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 OR4S1Q8NGB4 309 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 OR8B3Q8NGG8 313 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 OR10R2Q8NGX6 335 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 MED30Q96HR3 178 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 OR8B2Q96RD0 313 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 DPCDQ9BVM2 203 aaPredicted RBP22.56■■□□□ 1.2
HDAC3-201ENST00000305264 MMP27Q9H306 513 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 PEX16Q9Y5Y5 336 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 A3GALT2U3KPV4 340 aa22.56■■□□□ 1.2
HDAC3-201ENST00000305264 MALRD1Q5VYJ5 2156 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 DVL1O14640 695 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 FUT3P21217 361 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 USF1P22415 310 aaPredicted RBP22.55■■□□□ 1.2
HDAC3-201ENST00000305264 FAM189A2Q15884 450 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 NLRC3Q7RTR2 1065 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 ARHGAP5-AS1Q96IT6 56 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 CMTM3Q96MX0 182 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 CR1P17927 2039 aa22.55■■□□□ 1.2
HDAC3-201ENST00000305264 K7N7A8 449 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 TK1P04183 234 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 CDK2P24941 298 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 RAB40AQ8WXH6 277 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 SNX22Q96L94 193 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 NEDD4LQ96PU5 975 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 REG4Q9BYZ8 158 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 SPACA1Q9HBV2 294 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 SLC25A10Q9UBX3 287 aaPredicted RBP22.54■■□□□ 1.2
HDAC3-201ENST00000305264 FLNAP21333 2647 aaKnown RBP22.54■■□□□ 1.2
HDAC3-201ENST00000305264 IZUMO1Q8IYV9 350 aa22.54■■□□□ 1.2
HDAC3-201ENST00000305264 FAM25AB3EWG3 89 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 FAM25CB3EWG5 89 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 FAM25GB3EWG6 89 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 NDUFB3O43676 98 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 ATXN7L3Q14CW9 347 aaPredicted RBP22.53■■□□□ 1.2
HDAC3-201ENST00000305264 GRK1Q15835 563 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 OR8H2Q8N162 312 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 MAPK1IP1LQ8NDC0 245 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 DYRK2Q92630 601 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 RAB3CQ96E17 227 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 S100A16Q96FQ6 103 aaKnown RBP22.53■■□□□ 1.2
HDAC3-201ENST00000305264 SULT4A1Q9BR01 284 aa22.53■■□□□ 1.2
HDAC3-201ENST00000305264 ZMAT3Q9HA38 289 aaKnown RBP22.53■■□□□ 1.2
HDAC3-201ENST00000305264 MADCAM1Q13477 382 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 ST8SIA4Q92187 359 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 FAM234AQ9H0X4 552 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 PLEKHJ1Q9NW61 149 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 PTTG2Q9NZH5 202 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 CELSR1Q9NYQ6 3014 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 CLPXO76031 633 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 LRRC10Q5BKY1 277 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 OLFML2AQ68BL7 652 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 Q6ZTK2 550 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 PHF21AQ96BD5 680 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 RAB39BQ96DA2 213 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 PECRQ9BY49 303 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 ING3Q9NXR8 418 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 CLN8Q9UBY8 286 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 KCNK7Q9Y2U2 307 aa22.52■■□□□ 1.2
HDAC3-201ENST00000305264 ZANQ9Y493 2812 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 UBE2QL1A1L167 161 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 PHF1O43189 567 aaPredicted RBP22.51■■□□□ 1.19
HDAC3-201ENST00000305264 SCGNO76038 276 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 GNB3P16520 340 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 NDUFB7P17568 137 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 WDR25Q64LD2 544 aaPredicted RBP22.51■■□□□ 1.19
HDAC3-201ENST00000305264 OR4M1Q8NGD0 313 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 PLPPR1Q8TBJ4 325 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 NEK7Q8TDX7 302 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 FAAP24Q9BTP7 215 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 HSF4Q9ULV5 492 aa22.51■■□□□ 1.19
HDAC3-201ENST00000305264 MCRIP1C9JLW8 97 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 HIST1H1DP16402 221 aaKnown RBP22.5■■□□□ 1.19
HDAC3-201ENST00000305264 EDDM3AQ14507 147 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 SSBP3Q9BWW4 388 aaPredicted RBP22.5■■□□□ 1.19
HDAC3-201ENST00000305264 DIABLOQ9NR28 239 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 ARHGAP32A7KAX9 2087 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 MFNGO00587 321 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 GNB2P62879 340 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 LOXL1Q08397 574 aaPredicted RBP22.5■■□□□ 1.19
HDAC3-201ENST00000305264 ESCO2Q56NI9 601 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 CNIH2Q6PI25 160 aa22.5■■□□□ 1.19
HDAC3-201ENST00000305264 TPRX1Q8N7U7 411 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms