RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 WDR13Q9H1Z4 485 aa12.35□□□□□ -0.43
SHCBP1-201ENST00000303383 PLSCR3Q9NRY6 295 aa12.35□□□□□ -0.43
SHCBP1-201ENST00000303383 ATMQ13315 3056 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 KLF3P57682 345 aaPredicted RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 FXYD4P59646 89 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 BPIFB3P59826 476 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 HERV-K104P61576 105 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 NDUFA5Q16718 116 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 PAN3Q58A45 887 aaKnown RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 TMEM128Q5BJH2 165 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 TMEM108Q6UXF1 575 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 WDR86Q86TI4 376 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 ZFAND1Q8TCF1 268 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 GPR132Q9UNW8 380 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 TPRP12270 2363 aaKnown RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 C9orf170A2RU37 121 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 SIRPB1O00241 398 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 SNRPD2P62316 118 aaKnown RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 RBM14Q96PK6 669 aaKnown RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 ICE1Q9Y2F5 2266 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 CHD8Q9HCK8 2581 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 SH2D1BO14796 132 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 MLNRO43193 412 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 GLRXP35754 106 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 ABCA11PQ4W5N1 156 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 FAM76BQ5HYJ3 339 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 SYT3Q9BQG1 590 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 DPCDQ9BVM2 203 aaPredicted RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 TMPRSS13Q9BYE2 586 aa12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
SHCBP1-201ENST00000303383 OR5H14A6NHG9 310 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 PRAMEF6Q5VXH4 476 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 UNQ6494/PRO21346Q6UXR6 183 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 GRPEL2Q8TAA5 225 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 OSGIN2Q9Y236 505 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 TEX13DA0A0J9YY54 714 aaPredicted RBP12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 ZBTB25P24278 435 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 FCGR2CP31995 323 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 SEC61A1P61619 476 aaKnown RBP12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 SLC9A3R2Q15599 337 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 VKORC1Q9BQB6 163 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 NPTNQ9Y639 398 aa12.33□□□□□ -0.44
SHCBP1-201ENST00000303383 KIR2DS1A0A191URI9 304 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 PGA5P0DJD9 388 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 GLRA1P23415 457 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 KIR2DS4P43632 304 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 KIR2DS1Q14954 304 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 SURF2Q15527 256 aaPredicted RBP12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 ZNF826PQ6ZT77 177 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 C5orf66Q9H5L9 145 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 COMMD9Q9P000 198 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 BET1O15155 118 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 CTRB1P17538 263 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 CD40P25942 277 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 CTRB2Q6GPI1 263 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 LHFPL1Q86WI0 220 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 RELL2Q8NC24 303 aaPredicted RBP12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 C5orf51A6NDU8 294 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 ZNF205O95201 554 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 DIRAS3O95661 229 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 TK1P04183 234 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 ZNF728P0DKX0 622 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 AADACL3Q5VUY0 350 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 ASCC1Q8N9N2 400 aaKnown RBP12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 ELMOD3Q96FG2 381 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 FN3KRPQ9HA64 309 aa12.32□□□□□ -0.44
SHCBP1-201ENST00000303383 NBASA2RRP1 2371 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 CRYZL1O95825 349 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 MPPED2Q15777 294 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 C2orf68Q2NKX9 166 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 LRP11Q86VZ4 500 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 NRIP2Q9BQI9 281 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 CCSO14618 274 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 Q6ZR03 302 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 SGPP2Q8IWX5 399 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 TMEM185AQ8NFB2 350 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 MITD1Q8WV92 249 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 NGBQ9NPG2 151 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 C13orf42A0A1B0GVH6 325 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 ZSCAN5BA6NJL1 495 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 PCP4L1A6NKN8 68 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 OR2H2O95918 312 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 PTAFRP25105 342 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 RBMXP38159 391 aaKnown RBP12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 H2BFSP57053 126 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 BOLLQ8N9W6 283 aaKnown RBP12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 C1orf123Q9NWV4 160 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 TAAR3PQ9P1P4 343 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 PFDN2Q9UHV9 154 aa12.31□□□□□ -0.44
SHCBP1-201ENST00000303383 FXYD6-FXYD2A0A087WZ82 144 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 H7C1Q1 480 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms