RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GLAP06280 429 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 GMFBP60983 142 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 SNRPD2P62316 118 aaKnown RBP18.88■□□□□ 0.61
SMAD1-201ENST00000302085 NEK7Q8TDX7 302 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 CASTOR1Q8WTX7 329 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 GTF3AQ92664 365 aaKnown RBP18.88■□□□□ 0.61
SMAD1-201ENST00000302085 RND1Q92730 232 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 VKORC1Q9BQB6 163 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 HSPB11Q9Y547 144 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 NOS1APO75052 506 aaPredicted RBP18.88■□□□□ 0.61
SMAD1-201ENST00000302085 CD40P25942 277 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 SRSF7Q16629 238 aaKnown RBP eCLIP18.88■□□□□ 0.61
SMAD1-201ENST00000302085 PRAMEF6Q5VXH4 476 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 LIN54Q6MZP7 749 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 C5orf24Q7Z6I8 188 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 POC1AQ8NBT0 407 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 OPN4Q9UHM6 478 aa18.88■□□□□ 0.61
SMAD1-201ENST00000302085 PAIP2BQ9ULR5 123 aaKnown RBP18.88■□□□□ 0.61
SMAD1-201ENST00000302085 CADP27708 2225 aa18.87■□□□□ 0.61
SMAD1-201ENST00000302085 NXPH2O95156 264 aa18.87■□□□□ 0.61
SMAD1-201ENST00000302085 DUS4LO95620 317 aaKnown RBP18.87■□□□□ 0.61
SMAD1-201ENST00000302085 IGHV3-13P01766 116 aa18.87■□□□□ 0.61
SMAD1-201ENST00000302085 PGAM2P15259 253 aa18.87■□□□□ 0.61
SMAD1-201ENST00000302085 TMEM171Q8WVE6 324 aa18.87■□□□□ 0.61
SMAD1-201ENST00000302085 USB1Q9BQ65 265 aaKnown RBP18.87■□□□□ 0.61
SMAD1-201ENST00000302085 HES4Q9HCC6 221 aa18.87■□□□□ 0.61
SMAD1-201ENST00000302085 SLC23A1Q9UHI7 598 aa18.87■□□□□ 0.61
SMAD1-201ENST00000302085 ZNF44P15621 663 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 C11orf88Q6PI97 169 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 MEMO1Q9Y316 297 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 TRGV8A0A0C4DH27 118 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 SFT2D2O95562 160 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 OR2H2O95918 312 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 PPP3CBP16298 524 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 SUPT4H1P63272 117 aaKnown RBP18.86■□□□□ 0.61
SMAD1-201ENST00000302085 ZNF146Q15072 292 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 IGSF11Q5DX21 431 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 VHLLQ6RSH7 139 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 C20orf204Q6ZNR8 217 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 MRPL30Q8TCC3 161 aaKnown RBP18.86■□□□□ 0.61
SMAD1-201ENST00000302085 PHB2Q99623 299 aa18.86■□□□□ 0.61
SMAD1-201ENST00000302085 RGS13O14921 159 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 THBDP07204 575 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 HLA-GP17693 338 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 FCGR2CP31995 323 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 ECI1P42126 302 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 RBM39Q14498 530 aaKnown RBP18.85■□□□□ 0.61
SMAD1-201ENST00000302085 CLEC18BQ6UXF7 455 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 UNQ6494/PRO21346Q6UXR6 183 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 OR2Z1Q8NG97 314 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 ZCCHC14Q8WYQ9 949 aaKnown RBP18.85■□□□□ 0.61
SMAD1-201ENST00000302085 SYT3Q9BQG1 590 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 RIMS4Q9H426 269 aaPredicted RBP18.85■□□□□ 0.61
SMAD1-201ENST00000302085 UFSP2Q9NUQ7 469 aa18.85■□□□□ 0.61
SMAD1-201ENST00000302085 TRBV6-6A0A0A6YYG2 114 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 SIRPB1O00241 398 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 SLC33A1O00400 549 aaPredicted RBP18.84■□□□□ 0.61
SMAD1-201ENST00000302085 WNT9BO14905 357 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 SLC34A2O95436 690 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 RPS2P15880 293 aaKnown RBP18.84■□□□□ 0.61
SMAD1-201ENST00000302085 HOXA4Q00056 320 aaPredicted RBP18.84■□□□□ 0.61
SMAD1-201ENST00000302085 LGALSLQ3ZCW2 172 aaPredicted RBP18.84■□□□□ 0.61
SMAD1-201ENST00000302085 WDR82Q6UXN9 313 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 WFDC8Q8IUA0 241 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 OR5M8Q8NGP6 311 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 A6NLC8 198 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 CTSDP07339 412 aaPredicted RBP18.84■□□□□ 0.61
SMAD1-201ENST00000302085 SCTP09683 121 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 KLF3P57682 345 aaPredicted RBP18.84■□□□□ 0.61
SMAD1-201ENST00000302085 SLC9A3R2Q15599 337 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 KCTD9Q7L273 389 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 DHRS9Q9BPW9 319 aa18.84■□□□□ 0.61
SMAD1-201ENST00000302085 C14orf166Q9Y224 244 aaKnown RBP18.84■□□□□ 0.61
SMAD1-201ENST00000302085 NCOR2Q9Y618 2525 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 IGLV3-9A0A075B6K5 115 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 ZSCAN5BA6NJL1 495 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 DBX1A6NMT0 343 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 TRDCB7Z8K6 153 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 CCSO14618 274 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 SH2D1BO14796 132 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 KNG1P01042 644 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 SRSF4Q08170 494 aaKnown RBP18.83■□□□□ 0.61
SMAD1-201ENST00000302085 SPIN3Q5JUX0 258 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 ASCC1Q8N9N2 400 aaKnown RBP18.83■□□□□ 0.61
SMAD1-201ENST00000302085 FXYD6Q9H0Q3 95 aa18.83■□□□□ 0.61
SMAD1-201ENST00000302085 PIEZO1Q92508 2521 aa18.83■□□□□ 0.6
SMAD1-201ENST00000302085 PCNX1Q96RV3 2341 aa18.83■□□□□ 0.6
SMAD1-201ENST00000302085 ZNF728P0DKX0 622 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 RBMXP38159 391 aaKnown RBP18.82■□□□□ 0.6
SMAD1-201ENST00000302085 MZT1Q08AG7 82 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 PAN3Q58A45 887 aaKnown RBP18.82■□□□□ 0.6
SMAD1-201ENST00000302085 ZNF880Q6PDB4 577 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 ASB13Q8WXK3 278 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 PRORYQ9H606 182 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 SLA2Q9H6Q3 261 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 PRR13Q9NZ81 148 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 PLSCR5A0PG75 271 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 DPRXA6NFQ7 191 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 NFYAP23511 347 aaPredicted RBP18.82■□□□□ 0.6
SMAD1-201ENST00000302085 CD200P41217 278 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms