RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 CEACAM16Q2WEN9 425 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 TBC1D26Q86UD7 250 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 LGI3Q8N145 548 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 SPEM1Q8N4L4 309 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 CYB561D1Q8N8Q1 229 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 BOD1Q96IK1 185 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 NCKAP5O14513 1909 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 CHD3Q12873 2000 aaKnown RBP11.69□□□□□ -0.54
CTTN-201ENST00000301843 TP53I11O14683 189 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 HLA-HP01893 362 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 FOLR2P14207 255 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 DYNLT3P51808 116 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 RND3P61587 244 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 ZNF674Q2M3X9 581 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 ZNF611Q8N823 705 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 OR1F12Q8NHA8 337 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 TMEM54Q969K7 222 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 RAB39BQ96DA2 213 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 ZNF845Q96IR2 970 aaPredicted RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 ZNF286AQ9HBT8 521 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 A0A1W2PR80 420 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 RRP8O43159 456 aaKnown RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 GNRHRP30968 328 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 OTX1P32242 354 aaPredicted RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 TAGLN2P37802 199 aaKnown RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 EIF1P41567 113 aaKnown RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 PCOLCEQ15113 449 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 VASH2Q86V25 355 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 ZNF695Q8IW36 515 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 GAPTQ8N292 157 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 PRR18Q8N4B5 295 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 ABHD3Q8WU67 409 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 DCHS1Q96JQ0 3298 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 H3BQ15 152 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 SYNGR3O43761 229 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 EIF1BO60739 113 aaKnown RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 SRYQ05066 204 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 ZNF385CQ66K41 422 aaPredicted RBP11.68□□□□□ -0.54
CTTN-201ENST00000301843 ZNF818PQ6ZRF7 136 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 ADPRHL1Q8NDY3 354 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 OR1J1Q8NGS3 322 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 OR14L1PQ8NHC6 308 aa11.68□□□□□ -0.54
CTTN-201ENST00000301843 GTF3C1Q12789 2109 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 PROB1E7EW31 1015 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 K7N7A8 449 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 DKK1O94907 266 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 SMIM6P0DI80 62 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 LIFP15018 202 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 CTSSP25774 331 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 SUCLG1P53597 346 aaKnown RBP11.67□□□□□ -0.54
CTTN-201ENST00000301843 MALLQ13021 153 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 C10orf128Q5T292 105 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 OR51H1Q8NH63 302 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 FOXD3Q9UJU5 478 aaPredicted RBP11.67□□□□□ -0.54
CTTN-201ENST00000301843 IGLV3-32A0A0A0MS00 114 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 MPPED1O15442 326 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 CRYGSP22914 178 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 FGF8P55075 233 aaPredicted RBP11.67□□□□□ -0.54
CTTN-201ENST00000301843 TMEM267Q0VDI3 215 aaPredicted RBP11.67□□□□□ -0.54
CTTN-201ENST00000301843 DAZAP2Q15038 168 aaPredicted RBP11.67□□□□□ -0.54
CTTN-201ENST00000301843 WIPI1Q5MNZ9 446 aaPredicted RBP11.67□□□□□ -0.54
CTTN-201ENST00000301843 SPNS3Q6ZMD2 512 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 HIST2H3AQ71DI3 136 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 ARV1Q9H2C2 271 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 CCL28Q9NRJ3 127 aa11.67□□□□□ -0.54
CTTN-201ENST00000301843 RBFOX3A6NFN3 312 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 AP4M1O00189 453 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 IGHV2-5P01817 119 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 TCN2P20062 427 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 BCL3P20749 454 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 FOXG1P55316 489 aaPredicted RBP11.66□□□□□ -0.54
CTTN-201ENST00000301843 UBE2KP61086 200 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 HLA-BQ31612 363 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 Q8WTZ3 238 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 BCO1Q9HAY6 547 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 HSF4Q9ULV5 492 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 UMODP07911 640 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 GPM6AP51674 278 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 ERVFRD-1P60508 538 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 FAM27BQ5VT28 67 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 SPSB3Q6PJ21 355 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 AAED1Q7RTV5 226 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 GPR137CQ8N3F9 429 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 MOB3AQ96BX8 217 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 GALNT14Q96FL9 552 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 HS3ST3B1Q9Y662 390 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
CTTN-201ENST00000301843 WRBO00258 174 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 VAMP2P63027 116 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 CNN3Q15417 329 aaKnown RBP11.66□□□□□ -0.54
CTTN-201ENST00000301843 CLEC12BQ2HXU8 276 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 TMEM252Q8N6L7 170 aa11.66□□□□□ -0.54
CTTN-201ENST00000301843 OR4D5Q8NGN0 318 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms