RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 NR4A2P43354 598 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 OR3A1P47881 315 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 CAPZA1P52907 286 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 FGF12P61328 243 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 RPS27AP62979 156 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 MZT1Q08AG7 82 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 SMIM21Q3B7S5 101 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF404Q494X3 552 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ATAD3CQ5T2N8 411 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 TEX36Q5VZQ5 186 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 FAM53AQ6NSI3 398 aaPredicted RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ASCL4Q6XD76 172 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 DCDC5Q6ZRR9 648 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 DNM1P46Q6ZS02 220 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 TCF23Q7RTU1 214 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 MKXQ8IYA7 352 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 CMTM4Q8IZR5 234 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 OSR2Q8N2R0 312 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 BPIFB2Q8N4F0 458 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 SAMD12Q8N8I0 201 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ASCC1Q8N9N2 400 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNRF1Q8ND25 227 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 PXT1Q8NFP0 134 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 OR4S1Q8NGB4 309 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 OR4M1Q8NGD0 313 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ANGPTL6Q8NI99 470 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 MAFIPQ8WZ33 124 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ST8SIA4Q92187 359 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 MBD6Q96DN6 1003 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 SULT4A1Q9BR01 284 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 UQCC2Q9BRT2 126 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 SLIRPQ9GZT3 109 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 C6orf62Q9GZU0 229 aaPredicted RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 ZMAT3Q9HA38 289 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 BARX1Q9HBU1 254 aaPredicted RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 TMEM165Q9HC07 324 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 RHBDL2Q9NX52 303 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 MAB21L2Q9Y586 359 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 PRRC2AP48634 2157 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 CENPEQ02224 2701 aa5.39□□□□□ -1.55
DEPDC4-201ENST00000299185 PDZD2O15018 2839 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 SPG11Q96JI7 2443 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 CR1P17927 2039 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 MEIS3P1A6NDR6 274 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 LRRC30A6NM36 301 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 FOXI3A8MTJ6 420 aaPredicted RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 F5H0A9 414 aaPredicted RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 SLC33A1O00400 549 aaPredicted RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 NOS1APO75052 506 aaPredicted RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF737O75373 536 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 OR7C1O76099 320 aaPredicted RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 CYB5AP00167 134 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 KNG1P01042 644 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 IGHV2-5P01817 119 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 CSTBP04080 98 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 NDUFB7P17568 137 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ELK1P19419 428 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ZFP36P26651 326 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 GIFP27352 417 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 VEGFCP49767 419 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 LCN2P80188 198 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF181Q2M3W8 571 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 PAN3Q58A45 887 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 PLAC9Q5JTB6 97 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 UTF1Q5T230 341 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 C6orf201Q7Z4U5 140 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 TPRA1Q86W33 373 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 SAXO1Q8IYX7 474 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ZSCAN4Q8NAM6 433 aaPredicted RBP5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 SUMF2Q8NBJ7 301 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 OR51T1Q8NGJ9 327 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 MCFD2Q8NI22 146 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 NEK7Q8TDX7 302 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 NUDCD2Q8WVJ2 157 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 NINJ1Q92982 152 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 COQ2Q96H96 371 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ARHGAP5-AS1Q96IT6 56 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 S100A13Q99584 98 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ATG5Q9H1Y0 275 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF665Q9H7R5 613 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 DLL4Q9NR61 685 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 C19orf12Q9NSK7 152 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 IL36GQ9NZH8 169 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 ST3GAL6Q9Y274 331 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 F8P00451 2351 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 CELSR1Q9NYQ6 3014 aa5.38□□□□□ -1.55
DEPDC4-201ENST00000299185 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 FAM172BPA6NC97 362 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 TMEM235A6NFC5 223 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 FAM25AB3EWG3 89 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 FAM25CB3EWG5 89 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 FAM25GB3EWG6 89 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 DVL1O14640 695 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 TNFRSF13BO14836 293 aaPredicted RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 SIGLEC5O15389 551 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CLPXO76031 633 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 GTF2F2P13984 249 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 GNB3P16520 340 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CCL3L1P16619 93 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CDK2P24941 298 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms