RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ATXN7O15265 892 aaPredicted RBP21.02■□□□□ 0.95
SPTSSA-201ENST00000298130 SSSCA1O60232 199 aa21.02■□□□□ 0.95
SPTSSA-201ENST00000298130 GNRHRP30968 328 aa21.02■□□□□ 0.95
SPTSSA-201ENST00000298130 TMEM42Q69YG0 159 aa21.02■□□□□ 0.95
SPTSSA-201ENST00000298130 CPT1CQ8TCG5 803 aa21.02■□□□□ 0.95
SPTSSA-201ENST00000298130 CST7O76096 145 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 ACAA1P09110 424 aaPredicted RBP21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 GDF1P27539 372 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 FUT6P51993 359 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 OR2B8PP59922 312 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 EWSR1Q01844 656 aaKnown RBP eCLIP21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 SPINK14Q6IE38 97 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 OR51B6Q9H340 312 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 HSD17B6O14756 317 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 GPM6AP51674 278 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 OR56B2PQ8NGI1 322 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 SYT3Q9BQG1 590 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 GINS3Q9BRX5 216 aa21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 FGF23Q9GZV9 251 aaPredicted RBP21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 UBE2J1Q9Y385 318 aaPredicted RBP21.01■□□□□ 0.95
SPTSSA-201ENST00000298130 DNAJC13O75165 2243 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 LRRC3CA6NJW4 275 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 MPPED1O15442 326 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 HLA-HP01893 362 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 SEC11BP0C7V7 166 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 HAAOP46952 286 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 RAB5BP61020 215 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 LPAL2Q16609 132 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 ASCL4Q6XD76 172 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 TBC1D26Q86UD7 250 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 NANPQ8TBE9 248 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 NEK7Q8TDX7 302 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 EXTL1Q92935 676 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 SF3B5Q9BWJ5 86 aaKnown RBP21■□□□□ 0.95
SPTSSA-201ENST00000298130 ARV1Q9H2C2 271 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 PUS1Q9Y606 427 aaKnown RBP eCLIP21■□□□□ 0.95
SPTSSA-201ENST00000298130 IGSF23A1L1A6 192 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 GJE1A6NN92 205 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 FUT3P21217 361 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 PTAFRP25105 342 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 SRD5A2P31213 254 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 ADAM5Q6NVV9 412 aa21■□□□□ 0.95
SPTSSA-201ENST00000298130 IGKV1D-13A0A0B4J2D9 117 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 IGKV1-13P0DP09 117 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 GNMTQ14749 295 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 OR2V1Q8NHB1 315 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 ZNF488Q96MN9 340 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 PARPBPQ9NWS1 579 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 FBXO9Q9UK97 447 aaPredicted RBP20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 KIAA1549Q9HCM3 1950 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 ZNF816-ZNF321PA0A0X1KG74 233 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 PMS2CLQ68D20 193 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 ZNF818PQ6ZRF7 136 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 GAPTQ8N292 157 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 TMEM171Q8WVE6 324 aa20.99■□□□□ 0.95
SPTSSA-201ENST00000298130 C1orf196B1AJZ1 125 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 ADAM20O43506 726 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 CELA3AP09093 270 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 RUNX1Q01196 453 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 OR4D5Q8NGN0 318 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 S100A6P06703 90 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 FBP1P09467 338 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 IZUMO4Q1ZYL8 232 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 ZNF695Q8IW36 515 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 HLA-CQ95604 372 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 BOD1Q96IK1 185 aa20.98■□□□□ 0.95
SPTSSA-201ENST00000298130 ZNF724A8MTY0 619 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 OR2C3Q8N628 320 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 OR2G3Q8NGZ4 309 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 GPR179Q6PRD1 2367 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 ZNF503-AS2A6NEH8 195 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 EIF2S3LQ2VIR3 472 aaKnown RBP20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 C15orf54Q8N8G6 183 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 LRTM2Q8N967 370 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 HES7Q9BYE0 225 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 ASPMQ8IZT6 3477 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 C5orf49A4QMS7 147 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 H3BP45 60 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 ATP6V0CP27449 155 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 GPR157Q5UAW9 335 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 PPP1R32Q7Z5V6 425 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 PRRG4Q9BZD6 226 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 KCNJ16Q9NPI9 418 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 CCL28Q9NRJ3 127 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 POMT1Q9Y6A1 747 aa20.97■□□□□ 0.95
SPTSSA-201ENST00000298130 NKX2-1P43699 371 aaPredicted RBP20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 OR8B8Q15620 311 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 CALHM2Q9HA72 323 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 TMEM50AO95807 157 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 NGFP01138 241 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 MMP7P09237 267 aaPredicted RBP20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 ZNF14P17017 642 aaPredicted RBP20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 EPHA1P21709 976 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 ARF1P84077 181 aaKnown RBP20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 IL13RA2Q14627 380 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 HERPUD1Q15011 391 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 HAGHQ16775 308 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 MYPOPQ86VE0 399 aaPredicted RBP20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 ADGRG7Q96K78 797 aa20.96■□□□□ 0.95
SPTSSA-201ENST00000298130 PQLC2LA1A4F0 135 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms