RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 hCG_38984A0A1B0GV85 526 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 HMSDA8MTL9 139 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 ID4P47928 161 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 AADACL3Q5VUY0 350 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 JMJD6Q6NYC1 403 aaPredicted RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 DBX2Q6ZNG2 339 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 OVCH2Q7RTZ1 564 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 OR1S2Q8NGQ3 325 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 RRNAD1Q96FB5 475 aaKnown RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 DMRTA2Q96SC8 542 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 TSNAXQ99598 290 aaKnown RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 SYT3Q9BQG1 590 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 ADAT1Q9BUB4 502 aaKnown RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 SPRR3Q9UBC9 169 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 FAM96BQ9Y3D0 163 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 MED6O75586 246 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 F12P00748 615 aaPredicted RBP8□□□□□ -1.13
PRDM9-201ENST00000296682 NAT2P11245 290 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF708P17019 499 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 WT1P19544 449 aaPredicted RBP8□□□□□ -1.13
PRDM9-201ENST00000296682 VAMP2P63027 116 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 TMEM88Q6PEY1 159 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 BEND4Q6ZU67 534 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 NANOS1Q8WY41 292 aaKnown RBP8□□□□□ -1.13
PRDM9-201ENST00000296682 OCSTAMPQ9BR26 566 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 DOCK11Q5JSL3 2073 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 H0YIZ8 118 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 SHOXO15266 292 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 TIMM8AO60220 97 aaPredicted RBP8□□□□□ -1.13
PRDM9-201ENST00000296682 CST7O76096 145 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 TPT1P13693 172 aaKnown RBP8□□□□□ -1.13
PRDM9-201ENST00000296682 TBPP20226 339 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 TBC1D28Q2M2D7 210 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 FBXW9Q5XUX1 488 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 VWA1Q6PCB0 445 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF808Q8N4W9 903 aaPredicted RBP8□□□□□ -1.13
PRDM9-201ENST00000296682 DEFB108BQ8NET1 73 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 C2orf50Q96LR7 162 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 ERRFI1Q9UJM3 462 aaPredicted RBP8□□□□□ -1.13
PRDM9-201ENST00000296682 TNFSF18Q9UNG2 199 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 DNPH1O43598 174 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 TUSC2O75896 110 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 OR8U9P0C7N5 309 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 ARR3P36575 388 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 NHLRC3Q5JS37 347 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 RIPPLY2Q5TAB7 128 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 ABLIM2Q6H8Q1 611 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 OR8U1Q8NH10 309 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 LIME1Q9H400 295 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 CCL28Q9NRJ3 127 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 SLC2A9Q9NRM0 540 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 MTCH1Q9NZJ7 389 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 PCDHB10Q9UN67 800 aa8□□□□□ -1.13
PRDM9-201ENST00000296682 FIGNL2A6NMB9 653 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 DEFB108AA8MXU0 73 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 BCL2L11O43521 198 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 OR2F2O95006 317 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF883P0CG24 379 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 RPL12P30050 165 aaKnown RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 GABRA2P47869 451 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 SUPT4H1P63272 117 aaKnown RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 OR2F1Q13607 317 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 PLEKHN1Q494U1 663 aaPredicted RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 TFAP2EQ6VUC0 442 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 BAP18Q8IXM2 172 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 OR6K3Q8NGY3 331 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 KIRREL1Q96J84 757 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 MED12LQ86YW9 2145 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 F8W036 122 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 SERPINE2P07093 398 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 MMP7P09237 267 aaPredicted RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 CHATP28329 748 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF83P51522 516 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 RBM11P57052 281 aaKnown RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 BLOC1S1P78537 153 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 TLE1Q04724 770 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 RBM39Q14498 530 aaKnown RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 GNMTQ14749 295 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 RNPS1Q15287 305 aaKnown RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 LPCAT3Q6P1A2 487 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 ZFP62Q8NB50 900 aaPredicted RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 SLC25A40Q8TBP6 338 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 NCKAP5O14513 1909 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 RNF222A6NCQ9 220 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 EIF3GO75821 320 aaKnown RBP eCLIP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 CD8AP01732 235 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 OTX1P32242 354 aaPredicted RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 AKR1C3P42330 323 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 OR8G1Q15617 311 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 VAX1Q5SQQ9 334 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 KCNRGQ8N5I3 272 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 OPN3Q9H1Y3 402 aaPredicted RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 TAF9BQ9HBM6 251 aa7.99□□□□□ -1.13
PRDM9-201ENST00000296682 MRPS18CQ9Y3D5 142 aaKnown RBP7.99□□□□□ -1.13
PRDM9-201ENST00000296682 IGHV3-43A0A0B4J1X8 118 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 NME2P1O60361 137 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 C1QL1O75973 258 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 PET100P0DJ07 73 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 IGHV3-43DP0DP04 118 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms