RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 MBPP02686 304 aaPredicted RBP10.07□□□□□ -0.8
RHO-201ENST00000296271 CD46P15529 392 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 DEFA5Q01523 94 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 ARL6IP1Q15041 203 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 PPA1Q15181 289 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
RHO-201ENST00000296271 CEACAM21Q3KPI0 293 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 OR1K1Q8NGR3 316 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 SECTM1Q8WVN6 248 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 CNTNAP3BQ96NU0 1288 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 CNTNAP3Q9BZ76 1288 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 ZDHHC8Q9ULC8 765 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 EDARQ9UNE0 448 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 ZNF318Q5VUA4 2279 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 B8ZZF3 427 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 SS18L1O75177 396 aaPredicted RBP10.07□□□□□ -0.8
RHO-201ENST00000296271 PPYP01298 95 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 TFF1P04155 84 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 LYL1P12980 280 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 SUMF1Q8NBK3 374 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 BCL2L2Q92843 193 aaPredicted RBP10.07□□□□□ -0.8
RHO-201ENST00000296271 FAM96BQ9Y3D0 163 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 PTPRZ1P23471 2315 aaPredicted RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 MEX3AA1L020 520 aaKnown RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 AGFG2O95081 481 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 TPT1P13693 172 aaKnown RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 ADCYAP1P18509 176 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 GNRHRP30968 328 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 IDH3GP51553 393 aaPredicted RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 MST1LQ2TV78 715 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 WDR86Q86TI4 376 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 SLC30A7Q8NEW0 376 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 MSI2Q96DH6 328 aaKnown RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 CPNE2Q96FN4 548 aaPredicted RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 AQP10Q96PS8 301 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 AGPAT2O15120 278 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 FTH1P19P0C7X4 201 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 RPL12P30050 165 aaKnown RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 TNFSF10P50591 281 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 PLP2Q04941 152 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 RNPS1Q15287 305 aaKnown RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 NRN1LQ496H8 165 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 FAM74A3Q4VXF1 159 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 SPIN3Q5JUX0 258 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 FBXW9Q5XUX1 488 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 RTL6Q6ICC9 239 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 OR4A4PQ8NGN8 299 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 STOML3Q8TAV4 291 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 OR5P3Q8WZ94 311 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 MOB3AQ96BX8 217 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 USB1Q9BQ65 265 aaKnown RBP10.06□□□□□ -0.8
RHO-201ENST00000296271 OR2J1Q9GZK6 312 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 HRH4Q9H3N8 390 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 AMDHD2Q9Y303 409 aa10.06□□□□□ -0.8
RHO-201ENST00000296271 ADGRG4Q8IZF6 3080 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 ZNF705EA8MWA4 302 aaPredicted RBP10.05□□□□□ -0.8
RHO-201ENST00000296271 KRBOX1C9JBD0 128 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 ABCD4O14678 606 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 HSD17B6O14756 317 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 DEDDO75618 318 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 APLNRP35414 380 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 TMEM33P57088 247 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 FGF12P61328 243 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 SMUG1Q53HV7 270 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 FAM53AQ6NSI3 398 aaPredicted RBP10.05□□□□□ -0.8
RHO-201ENST00000296271 ZNF818PQ6ZRF7 136 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 WFDC1Q9HC57 220 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 BSNQ9UPA5 3926 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 ANKRD11Q6UB99 2663 aaPredicted RBP10.05□□□□□ -0.8
RHO-201ENST00000296271 H0YL77 283 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 GPR31O00270 319 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 FGF16O43320 207 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 IGHV1-2P23083 117 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 ARR3P36575 388 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 LPAR6P43657 344 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 CEBPDP49716 269 aaPredicted RBP10.05□□□□□ -0.8
RHO-201ENST00000296271 GUCA2BQ16661 112 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 PRR18Q8N4B5 295 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 SUMF2Q8NBJ7 301 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 LRRC46Q96FV0 321 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 TRIB1Q96RU8 372 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 Q9N2K0 584 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 CCL28Q9NRJ3 127 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 FZR1Q9UM11 496 aa10.05□□□□□ -0.8
RHO-201ENST00000296271 HEATR1Q9H583 2144 aaKnown RBP10.04□□□□□ -0.8
RHO-201ENST00000296271 TRAV24A0A0B4J272 114 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 K7EPK0 472 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 NAPSAO96009 420 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 CST4P01036 141 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 HERV-K104P61576 105 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 NHLH2Q02577 135 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 IZUMO4Q1ZYL8 232 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 TMEM268Q5VZI3 342 aa10.04□□□□□ -0.8
RHO-201ENST00000296271 TMEM211Q6ICI0 200 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms