RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 COMMD1Q8N668 190 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 DYRK2Q92630 601 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 AICDAQ9GZX7 198 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 UBTD1Q9HAC8 227 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 RNF150Q9ULK6 438 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 APOA2P02652 100 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 FOSL1P15407 271 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 DNASE2BQ8WZ79 361 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 ALX4Q9H161 411 aaPredicted RBP11.81□□□□□ -0.52
HPS3-201ENST00000296051 PCOLCE2Q9UKZ9 415 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 MPDZO75970 2070 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 PKDREJQ9NTG1 2253 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 UBE2G2P60604 165 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 HFEQ30201 348 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 TFAP2EQ6VUC0 442 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 ZNF485Q8NCK3 441 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 OR8B12Q8NGG6 310 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 M1APQ8TC57 530 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 GNB4Q9HAV0 340 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 IL17BQ9UHF5 180 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 DNASE2O00115 360 aaPredicted RBP11.81□□□□□ -0.52
HPS3-201ENST00000296051 MPGP29372 298 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 FHITP49789 147 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 DRAM2Q6UX65 266 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 CATSPERDQ86XM0 798 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 ZDHHC23Q8IYP9 409 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 APOBEC3DQ96AK3 386 aaPredicted RBP11.81□□□□□ -0.52
HPS3-201ENST00000296051 MOB1AQ9H8S9 216 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 MMP7P09237 267 aaPredicted RBP11.81□□□□□ -0.52
HPS3-201ENST00000296051 RPS11P62280 158 aaKnown RBP eCLIP11.81□□□□□ -0.52
HPS3-201ENST00000296051 H3F3AP84243 136 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
HPS3-201ENST00000296051 SKP2Q13309 424 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 FAM210BQ96KR6 192 aa11.81□□□□□ -0.52
HPS3-201ENST00000296051 A0A087X0M5 115 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 A0A1B0GX30 115 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 KLF4O43474 513 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ACTL6AO96019 429 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 LPAR6P43657 344 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 NHLH2Q02577 135 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ATP1A1-AS1Q5TC04 95 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 OR2C3Q8N628 320 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 TMEM105Q8N8V8 129 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 SLC26A10Q8NG04 563 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 OR10J5Q8NHC4 309 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ZNF501Q96CX3 271 aaPredicted RBP11.8□□□□□ -0.52
HPS3-201ENST00000296051 RIMS4Q9H426 269 aaPredicted RBP11.8□□□□□ -0.52
HPS3-201ENST00000296051 TNFRSF19Q9NS68 423 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ADAM11O75078 769 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 CLEC3BP05452 202 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 IL11P20809 199 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 KITLGP21583 273 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ZBTB25P24278 435 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ACKR3P25106 362 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ZNF345Q14585 488 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 PNLIPRP3Q17RR3 467 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 NCR3LG1Q68D85 454 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 OR13D1Q8NGV5 346 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 HSF4Q9ULV5 492 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 SPG11Q96JI7 2443 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 MDFIC2A0A1B0GVS7 189 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 A8MXE2 369 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 DVL1O14640 695 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ADAM20O43506 726 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 PNLIPP16233 465 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 LINC01590Q5TEZ4 76 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 OR10C1Q96KK4 312 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 TXN2Q99757 166 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 NMES1Q9C002 83 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 WDR13Q9H1Z4 485 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 V9GYS6 101 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 MYO7BQ6PIF6 2116 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 A0A1W2PRD5 423 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 A0A1W2PRF3 423 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 A0A1W2PRM7 423 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 MSGN1A6NI15 193 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 ZNF32P17041 273 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 RPL29P47914 159 aaKnown RBP11.8□□□□□ -0.52
HPS3-201ENST00000296051 C21orf62-AS1Q17RA5 79 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 SLC23A3Q6PIS1 610 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 UNQ9370/PRO34162Q6UXP9 181 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 RPS4Y2Q8TD47 263 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 FAM103A1Q9BTL3 118 aaKnown RBP11.8□□□□□ -0.52
HPS3-201ENST00000296051 SCNM1Q9BWG6 230 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 HIF1ANQ9NWT6 349 aa11.8□□□□□ -0.52
HPS3-201ENST00000296051 RBBP6Q7Z6E9 1792 aaKnown RBP11.8□□□□□ -0.52
HPS3-201ENST00000296051 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 CELA2AP08217 269 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 PABPC1L2AQ5JQF8 200 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 RHOVQ96L33 236 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 KIAA1456Q9P272 454 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 RPH3ALQ9UNE2 315 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 ANKRD36A6QL64 1941 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 NDUFB3O43676 98 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 SLC25A4P12235 298 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 SLC36A1Q7Z2H8 476 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 TUSC5Q8IXB3 177 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 SHISA5Q8N114 240 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 OSR2Q8N2R0 312 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms