RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 GALR2O43603 387 aaPredicted RBP17.11■□□□□ 0.33
CXCL16-201ENST00000293778 DUSP1P28562 367 aa17.11■□□□□ 0.33
CXCL16-201ENST00000293778 EIF5AP63241 154 aaKnown RBP17.11■□□□□ 0.33
CXCL16-201ENST00000293778 OR2A2Q6IF42 318 aa17.11■□□□□ 0.33
CXCL16-201ENST00000293778 ZNF573Q86YE8 665 aa17.11■□□□□ 0.33
CXCL16-201ENST00000293778 LGI3Q8N145 548 aa17.11■□□□□ 0.33
CXCL16-201ENST00000293778 BPIFCQ8NFQ6 507 aa17.11■□□□□ 0.33
CXCL16-201ENST00000293778 GLYATL2Q8WU03 294 aa17.11■□□□□ 0.33
CXCL16-201ENST00000293778 GMPPAQ96IJ6 420 aaPredicted RBP17.11■□□□□ 0.33
CXCL16-201ENST00000293778 GLS2Q9UI32 602 aa17.11■□□□□ 0.33
CXCL16-201ENST00000293778 H7C1Q1 480 aa17.1■□□□□ 0.33
CXCL16-201ENST00000293778 HSPB6O14558 160 aa17.1■□□□□ 0.33
CXCL16-201ENST00000293778 GNG3P63215 75 aa17.1■□□□□ 0.33
CXCL16-201ENST00000293778 OR2T2Q6IF00 324 aa17.1■□□□□ 0.33
CXCL16-201ENST00000293778 MSI2Q96DH6 328 aaKnown RBP17.1■□□□□ 0.33
CXCL16-201ENST00000293778 PLK3Q9H4B4 646 aa17.1■□□□□ 0.33
CXCL16-201ENST00000293778 PHF1O43189 567 aaPredicted RBP17.09■□□□□ 0.33
CXCL16-201ENST00000293778 DIRAS3O95661 229 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 APOC3P02656 99 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 FTH1P19P0C7X4 201 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 CCL11P51671 97 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 BTN1A1Q13410 526 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 RPL7L1Q6DKI1 246 aaKnown RBP17.09■□□□□ 0.33
CXCL16-201ENST00000293778 ZNF488Q96MN9 340 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 FBXO9Q9UK97 447 aaPredicted RBP17.09■□□□□ 0.33
CXCL16-201ENST00000293778 SPAARA0A1B0GVQ0 90 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 RAB19A4D1S5 217 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 MBPP02686 304 aaPredicted RBP17.09■□□□□ 0.33
CXCL16-201ENST00000293778 TK1P04183 234 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 FAM157CP0CG43 387 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 SPINK2P20155 84 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 CA6P23280 308 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 IL32P24001 234 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 SRSF6Q13247 344 aaKnown RBP17.09■□□□□ 0.33
CXCL16-201ENST00000293778 TSC22D1Q15714 1073 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 TBC1D28Q2M2D7 210 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 SPATA46Q5T0L3 261 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 UQCC3Q6UW78 93 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 PARD6AQ9NPB6 346 aa17.09■□□□□ 0.33
CXCL16-201ENST00000293778 BET1O15155 118 aa17.08■□□□□ 0.33
CXCL16-201ENST00000293778 SCTP09683 121 aa17.08■□□□□ 0.33
CXCL16-201ENST00000293778 C5orf24Q7Z6I8 188 aa17.08■□□□□ 0.33
CXCL16-201ENST00000293778 LINC00596Q86U02 117 aa17.08■□□□□ 0.33
CXCL16-201ENST00000293778 FAM185AQ8N0U4 392 aa17.08■□□□□ 0.33
CXCL16-201ENST00000293778 NARS2Q96I59 477 aaKnown RBP17.08■□□□□ 0.33
CXCL16-201ENST00000293778 TAF9BQ9HBM6 251 aa17.08■□□□□ 0.33
CXCL16-201ENST00000293778 SPACA1Q9HBV2 294 aa17.08■□□□□ 0.33
CXCL16-201ENST00000293778 KIR2DS1A0A191URI9 304 aa17.08■□□□□ 0.32
CXCL16-201ENST00000293778 MPPED1O15442 326 aa17.08■□□□□ 0.32
CXCL16-201ENST00000293778 KIR2DS4P43632 304 aa17.08■□□□□ 0.32
CXCL16-201ENST00000293778 IL24Q13007 206 aa17.08■□□□□ 0.32
CXCL16-201ENST00000293778 KIR2DS1Q14954 304 aa17.08■□□□□ 0.32
CXCL16-201ENST00000293778 TP53RKQ96S44 253 aa17.08■□□□□ 0.32
CXCL16-201ENST00000293778 C3orf85A0A1B0GTC6 90 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 TRDCB7Z8K6 153 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 GNRHRP30968 328 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 EIF5AL1Q6IS14 154 aaKnown RBP17.07■□□□□ 0.32
CXCL16-201ENST00000293778 SUMF2Q8NBJ7 301 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 FDCSPQ8NFU4 85 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 LHFPL5Q8TAF8 219 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 ARL11Q969Q4 196 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 PLEKHA2Q9HB19 425 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 FBXL17Q9UF56 701 aa17.07■□□□□ 0.32
CXCL16-201ENST00000293778 E5RGE8 158 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 ZNF14P17017 642 aaPredicted RBP17.06■□□□□ 0.32
CXCL16-201ENST00000293778 FAM58AQ8N1B3 248 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 ZNF565Q8N9K5 539 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 PKIBQ9C010 78 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 OR51I2Q9H344 312 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 ASCL3Q9NQ33 180 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 GLRX2Q9NS18 164 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 CLCF1Q9UBD9 225 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 LPAR3Q9UBY5 353 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 LHX6Q9UPM6 363 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 AMDHD2Q9Y303 409 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 NSG2Q9Y328 171 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 SHANK1Q9Y566 2161 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 ZNF705EA8MWA4 302 aaPredicted RBP17.06■□□□□ 0.32
CXCL16-201ENST00000293778 IGHG3P01860 377 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 RCC1P18754 421 aaPredicted RBP17.06■□□□□ 0.32
CXCL16-201ENST00000293778 TMEM33P57088 247 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 TGFBR3Q03167 851 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 HERPUD1Q15011 391 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 MEX3BQ6ZN04 569 aaKnown RBP17.06■□□□□ 0.32
CXCL16-201ENST00000293778 MYPOPQ86VE0 399 aaPredicted RBP17.06■□□□□ 0.32
CXCL16-201ENST00000293778 GCNT2Q8N0V5 402 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 SECTM1Q8WVN6 248 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 RIMS4Q9H426 269 aaPredicted RBP17.06■□□□□ 0.32
CXCL16-201ENST00000293778 ZFP57Q9NU63 452 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 TMED3Q9Y3Q3 217 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 ATP23Q9Y6H3 246 aa17.06■□□□□ 0.32
CXCL16-201ENST00000293778 J3QW42 95 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 SIGLEC5O15389 551 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 SLC34A2O95436 690 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 CELA3BP08861 270 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 IGHV1-2P23083 117 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 UBE2NP61088 152 aaKnown RBP17.05■□□□□ 0.32
CXCL16-201ENST00000293778 SRPXP78539 464 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 MRPL49Q13405 166 aaKnown RBP17.05■□□□□ 0.32
CXCL16-201ENST00000293778 IL13RA2Q14627 380 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms