RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 ZNF488Q96MN9 340 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 TECTBQ96PL2 329 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 RCL1Q9Y2P8 373 aaKnown RBP18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 LNP1A1A4G5 178 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 LILRA1O75019 489 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 UCP3P55916 312 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 RAB1AP62820 205 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 SPIN3Q5JUX0 258 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 DEFB123Q8N688 67 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 TMEM251Q8N6I4 163 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 SUMF1Q8NBK3 374 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 UBAC2Q8NBM4 344 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 ZPBPQ9BS86 351 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 LINC00470Q9BZP3 86 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 R4GN57 208 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 KNTC1P50748 2209 aa18.62■□□□□ 0.57
PAXBP1-201ENST00000290178 C3orf85A0A1B0GTC6 90 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 MPPED1O15442 326 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 SYNGR1O43759 233 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 C1QL1O75973 258 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 SYNGR4O95473 234 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 NUFIP2Q7Z417 695 aaKnown RBP18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 SH3BGRL3Q9H299 93 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 PARP11Q9NR21 331 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 NKX2-6A6NCS4 301 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 NME2P1O60361 137 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 SNAPINO95295 136 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 HFEQ30201 348 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 DCAF10Q5QP82 559 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 DMBX1Q8NFW5 382 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 USB1Q9BQ65 265 aaKnown RBP18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 B4GALT7Q9UBV7 327 aa18.61■□□□□ 0.57
PAXBP1-201ENST00000290178 CD5P06127 495 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 PLGLB1Q02325 96 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 SWI5Q1ZZU3 235 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 NRN1LQ496H8 165 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 DHRS7BQ6IAN0 325 aaPredicted RBP18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 ZDHHC23Q8IYP9 409 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 SPAG16Q8N0X2 631 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 NEK7Q8TDX7 302 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 DDA1Q9BW61 102 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 IL17BQ9UHF5 180 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 F2RL1P55085 397 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 HERPUD1Q15011 391 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 CEACAM21Q3KPI0 293 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 AKIRIN2Q53H80 203 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 ZNF818PQ6ZRF7 136 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 TBC1D26Q86UD7 250 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 RFNGQ9Y644 331 aa18.6■□□□□ 0.57
PAXBP1-201ENST00000290178 IGKV1D-13A0A0B4J2D9 117 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 ST8SIA3O43173 380 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 GPR137BO60478 399 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 GLAP06280 429 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 IGKV1-13P0DP09 117 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 PVALBP20472 110 aaPredicted RBP18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 ETV3LQ6ZN32 361 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 VASH2Q86V25 355 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 CCDC71LQ8N9Z2 235 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 HSD17B11Q8NBQ5 300 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 Q8NFD4 153 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 C12orf49Q9H741 205 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 Q9N2K0 584 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 URB1O60287 2271 aaKnown RBP18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 FGF12P61328 243 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 APH1AQ96BI3 265 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 AKR1E2Q96JD6 320 aa18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 SAV1Q9H4B6 383 aaPredicted RBP18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 FBXO9Q9UK97 447 aaPredicted RBP18.59■□□□□ 0.57
PAXBP1-201ENST00000290178 H7C2Y5 167 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 LINC01387J3KSC0 135 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 H2AFB1P0C5Y9 115 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 ZNF616Q08AN1 781 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 DPPA2Q7Z7J5 298 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 GAPTQ8N292 157 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 OR4D5Q8NGN0 318 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 APOBEC3DQ96AK3 386 aaPredicted RBP18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 PRSS50Q9UI38 385 aa18.58■□□□□ 0.57
PAXBP1-201ENST00000290178 FAM157AC9JC47 383 aa18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 SLC33A1O00400 549 aaPredicted RBP18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 MIDNQ504T8 468 aa18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 HIKESHIQ53FT3 197 aa18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 FAM76BQ5HYJ3 339 aa18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 KIRREL1Q96J84 757 aa18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 POM121L2Q96KW2 1035 aa18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 ARV1Q9H2C2 271 aa18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 UBE2J1Q9Y385 318 aaPredicted RBP18.58■□□□□ 0.56
PAXBP1-201ENST00000290178 IGKV1-6A0A0C4DH72 117 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 HSD17B6O14756 317 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 NXPH3O95157 252 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 NAPSAO96009 420 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 C20orf204Q6ZNR8 217 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 TMEM222Q9H0R3 208 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 MAGT1Q9H0U3 335 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 PLSCR2Q9NRY7 297 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 FAM212BQ9NTI7 297 aaPredicted RBP18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 TMED3Q9Y3Q3 217 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 LIPGQ9Y5X9 500 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 A0A1B0GV50 99 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 FAM24AA6NFZ4 105 aa18.57■□□□□ 0.56
PAXBP1-201ENST00000290178 TRAPPC2LH3BP13 241 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms