RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TLCD1Q96CP7 247 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SMARCD1Q96GM5 515 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 OXGR1Q96P68 337 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PECRQ9BY49 303 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PRO0628Q9UI54 55 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ST3GAL6Q9Y274 331 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZNF705GA8MUZ8 300 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 B8ZZF3 427 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PLIN3O60664 434 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 GABRG2P18507 467 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 HOXA5P20719 270 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 KIR2DS2P43631 304 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 INCA1Q0VD86 236 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZNF146Q15072 292 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 TMEM52BQ4KMG9 183 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ATP5L2Q7Z4Y8 100 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 CARM1Q86X55 608 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 AQP11Q8NBQ7 271 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 OR6T1Q8NGN1 323 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 LMO3Q8TAP4 145 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 NEIL3Q8TAT5 605 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 KLF6Q99612 283 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 NIPSNAP1Q9BPW8 284 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 Q9UF83 564 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 LRRC42Q9Y546 428 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 CACNA1GO43497 2377 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 TRAV39A0A0B4J263 110 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 KBTBD11O94819 623 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 NBEAP1P0C6P0 100 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 GKN3PP0CG01 181 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ELK1P19419 428 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 GPX4P36969 197 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 PRDX1Q06830 199 aaKnown RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZNF493Q6ZR52 646 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 Q6ZSR3 168 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 IFT20Q8IY31 132 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SLC26A10Q8NG04 563 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SPPL2BQ8TCT7 592 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SLC35B4Q969S0 331 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 NABP1Q96AH0 204 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 WDR34Q96EX3 536 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 FBXL15Q9H469 300 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 UGT1A7Q9HAW7 530 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 CMTM6Q9NX76 183 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 POLR2AP24928 1970 aaKnown RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 LY6G6EA0A0G2JKS1 128 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 MIF4GDA9UHW6 222 aaKnown RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 CTNSO60931 367 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 TACSTD2P09758 323 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SELEP16581 610 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PPICP45877 212 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 APOC4P55056 127 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 CDKN2DP55273 166 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ERVS71-1P61550 626 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZNF235Q14590 738 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 DEFB115Q30KQ5 88 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 KLHL12Q53G59 568 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 OR2B11Q5JQS5 317 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PRSS57Q6UWY2 283 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 TEX43Q6ZNM6 134 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 C9orf139Q6ZV77 190 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 STX19Q8N4C7 294 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 OR2L2Q8NH16 312 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 WBP1Q96G27 269 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 YPEL4Q96NS1 127 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 HBEGFQ99075 208 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 CDX2Q99626 313 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 TBL1XR1Q9BZK7 514 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZNF430Q9H8G1 570 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 MYH6P13533 1939 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 DISC1C4P0D8 188 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 TPST1O60507 370 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PGA5P0DJD9 388 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 LORP23490 312 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 KIR2DS4P43632 304 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 FABP6P51161 128 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ERCC8Q13216 396 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 GSG1LQ6UXU4 331 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PNKDQ8N490 385 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZNF382Q96SR6 550 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PBDC1Q9BVG4 233 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 NOX3Q9HBY0 568 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 PAK5Q9P286 719 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 GINS2Q9Y248 185 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 KCNE3Q9Y6H6 103 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 TRAV8-2A0A0B4J237 113 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 IGHV3-20A0A0C4DH32 117 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 CD300LBA8K4G0 201 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 AZIN1O14977 448 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 FAM189A1O60320 539 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 HLA-DPB1P04440 258 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 PGA4P0DJD7 388 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 PGA3P0DJD8 388 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 LOXP28300 417 aaPredicted RBP2.21□□□□□ -2.06
CHD1-201ENST00000284049 PFN2P35080 140 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 ZNF121P58317 390 aaPredicted RBP2.21□□□□□ -2.06
CHD1-201ENST00000284049 SSBP2P81877 361 aaPredicted RBP2.21□□□□□ -2.06
CHD1-201ENST00000284049 KLF9Q13886 244 aaPredicted RBP2.21□□□□□ -2.06
CHD1-201ENST00000284049 C1orf195Q5TG92 126 aa2.21□□□□□ -2.06
CHD1-201ENST00000284049 LRRC52Q8N7C0 313 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms