RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 C19orf57Q0VDD7 668 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 GUSBP11Q6P575 273 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF793Q6ZN11 406 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 OR5C1Q8NGR4 320 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 PPP1R1CQ8WVI7 109 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 USF3Q68DE3 2245 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 A0A0B4J293 547 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 C3orf80F5H4A9 247 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 K7N7A8 449 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 CRXO43186 299 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-201ENST00000283254 CFDP00746 253 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-201ENST00000283254 GHRHP01286 108 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 GYPAP02724 150 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 MELTFP08582 738 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 HIST1H3AP68431 136 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 ROM1Q03395 351 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 SPRED3Q2MJR0 410 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 CD300LDQ6UXZ3 194 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 CXorf67Q86X51 503 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-201ENST00000283254 NRG4Q8WWG1 115 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 DDB2Q92466 427 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 MCHR2Q969V1 340 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 HARBI1Q96MB7 349 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 OR4C12Q96R67 309 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 CDX2Q99626 313 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-201ENST00000283254 NIT2Q9NQR4 276 aa3.61□□□□□ -1.83
SCN3A-201ENST00000283254 SMCHD1A6NHR9 2005 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 TRBV23-1A0A0A0MS06 115 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 C5orf52A6NGY3 159 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 RER1O15258 196 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 CTSDP07339 412 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 GLI4P10075 376 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 MC5RP33032 325 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 PMELP40967 661 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 RPL31P62899 125 aaKnown RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 MPV17LQ2QL34 196 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 LRRC75BQ2VPJ9 315 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 OR52M1Q8NGK5 317 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 RFESDQ8TAC1 157 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 MRGPRDQ8TDS7 321 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 METTL26Q96S19 204 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 GPR27Q9NS67 375 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 DDX60Q8IY21 1712 aaKnown RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 SHANK1Q9Y566 2161 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 EMDP50402 254 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 TMEM241Q24JQ0 296 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 TP53I13Q8NBR0 393 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 SCNM1Q9BWG6 230 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 CHST5Q9GZS9 411 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 GSX1Q9H4S2 264 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF275Q9NSD4 429 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 TRAPPC1Q9Y5R8 145 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 NDUFB6O95139 128 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 PRSS1P07477 247 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 COL8A1P27658 744 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 FUNDC1Q8IVP5 155 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 D2HGDHQ8N465 521 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 C5orf17Q8NAS9 161 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 OR10A7Q8NGE5 316 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 DDA1Q9BW61 102 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 SLC35B3Q9H1N7 401 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF768Q9H5H4 540 aaKnown RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 SIGLEC7Q9Y286 467 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF638Q14966 1978 aaKnown RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 MTORP42345 2549 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 TRDCB7Z8K6 153 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 CCSO14618 274 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 ONECUT2O95948 504 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 PMCHP20382 165 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 MMP15P51511 669 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 METAP1P53582 386 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 ATP5J2P56134 94 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 COL9A2Q14055 689 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 CLEC12BQ2HXU8 276 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 TM4SF20Q53R12 229 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 C10orf113Q5VZT2 155 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 GLDNQ6ZMI3 551 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 MMD2Q8IY49 270 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 OR1B1Q8NGR6 318 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 RASL10BQ96S79 203 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 P2RX4Q99571 388 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 OR2H1Q9GZK4 316 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 AP5S1Q9NUS5 200 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 ZMAT5Q9UDW3 170 aaKnown RBP3.6□□□□□ -1.83
SCN3A-201ENST00000283254 CDC42EP3Q9UKI2 254 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 RGPD1P0DJD0 1748 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 FAM181BA6NEQ2 426 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 HELTA6NFD8 242 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 SYNGR1O43759 233 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 PDE6DO43924 150 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 CST7O76096 145 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 PGA4P0DJD7 388 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 PGA5P0DJD9 388 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 FZD5Q13467 585 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 HIST3H3Q16695 136 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 FAM74A3Q4VXF1 159 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 TMEM78Q5T7P6 136 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 BATF2Q8N1L9 274 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 OR2C3Q8N628 320 aa3.6□□□□□ -1.83
SCN3A-201ENST00000283254 WDR13Q9H1Z4 485 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms