RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 SIX6O95475 246 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 MELTFP08582 738 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 RD3LP0DJH9 198 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 AMY2BP19961 511 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 RBM11P57052 281 aaKnown RBP9.34□□□□□ -0.91
GGPS1-201ENST00000282841 IKZF1Q13422 519 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 AANATQ16613 207 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 TIMM23BQ5SRD1 257 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 LIN54Q6MZP7 749 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 CCDC54Q8NEL0 328 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 OR5A2Q8NGI9 324 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 OR13C8Q8NGS7 320 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 NEK7Q8TDX7 302 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 NIT2Q9NQR4 276 aa9.34□□□□□ -0.91
GGPS1-201ENST00000282841 PURGQ9UJV8 347 aaKnown RBP9.34□□□□□ -0.91
GGPS1-201ENST00000282841 A0A0A6YYH2 397 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 A6NJ64 397 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 CRHP06850 196 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 RAB13P51153 203 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 GNG3P63215 75 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 C2orf68Q2NKX9 166 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 TMEM229BQ8NBD8 167 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 OR2Z1Q8NG97 314 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 RND1Q92730 232 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 TM2D1Q9BX74 207 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 MED28Q9H204 178 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 FN3KRPQ9HA64 309 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 GHRLQ9UBU3 117 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 OR14J1Q9UGF5 321 aa9.34□□□□□ -0.92
GGPS1-201ENST00000282841 USP9XQ93008 2570 aaPredicted RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 ZNF462Q96JM2 2506 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 VPS13CQ709C8 3753 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 GPR37O15354 613 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 CRYAAP02489 173 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 CHATP28329 748 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 GCH1P30793 250 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 FAUP35544 74 aaKnown RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 RRAS2P62070 204 aaPredicted RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 TSPAN5P62079 268 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 MAB21L1Q13394 359 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 ADAM5Q6NVV9 412 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 SEZ6L2Q6UXD5 910 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 ZFAND1Q8TCF1 268 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 MARCH1Q8TCQ1 289 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 EMG1Q92979 244 aaKnown RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 CMSS1Q9BQ75 279 aaKnown RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 OR51I2Q9H344 312 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 TAS2R8Q9NYW2 309 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 hCG_1807616A0A1W2PRN6 198 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 C16orf97H3BN30 126 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 SPRY3O43610 288 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 IFNA6P05013 189 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 ACAA1P09110 424 aaPredicted RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 GSTP1P09211 210 aaKnown RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 ASCL4Q6XD76 172 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 SSX9Q7RTT3 188 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 ADAD2Q8NCV1 583 aaKnown RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 NEUROG1Q92886 237 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 FAM122AQ96E09 287 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 C7orf50Q9BRJ6 194 aaKnown RBP9.33□□□□□ -0.92
GGPS1-201ENST00000282841 CA10Q9NS85 328 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 ZFP57Q9NU63 452 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 TMEM100Q9NV29 134 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 VSIG4Q9Y279 399 aa9.33□□□□□ -0.92
GGPS1-201ENST00000282841 LINC00862A6NCI5 91 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 SIRPB1O00241 398 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 SULT1C2O00338 296 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 ABCD4O14678 606 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 THBDP07204 575 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 ZNF16P17020 682 aaPredicted RBP9.32□□□□□ -0.92
GGPS1-201ENST00000282841 AKR1C4P17516 323 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 SPCS3P61009 180 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 RBMS2Q15434 407 aaKnown RBP9.32□□□□□ -0.92
GGPS1-201ENST00000282841 PCSK4Q6UW60 755 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 TGIF2LYQ8IUE0 185 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 FAM219AQ8IW50 185 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 MKXQ8IYA7 352 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 PXT1Q8NFP0 134 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 LINC01560Q8TB33 94 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 DTD1Q8TEA8 209 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 WFIKKN1Q96NZ8 548 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 EHFQ9NZC4 300 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 COPZ2Q9P299 210 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 SLC23A1Q9UHI7 598 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 MPC1Q9Y5U8 109 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 NAP1L6A6NFF2 107 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 RBPJQ06330 500 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 ZNF718Q3SXZ3 478 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 FAM201AQ5SY85 155 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 ATPAF1Q5TC12 328 aaPredicted RBP9.32□□□□□ -0.92
GGPS1-201ENST00000282841 RGS7BPQ6MZT1 257 aaPredicted RBP9.32□□□□□ -0.92
GGPS1-201ENST00000282841 SLC22A25Q6T423 547 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 CCDC107Q8WV48 283 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 ZNF251Q9BRH9 671 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 LIME1Q9H400 295 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 AMDHD2Q9Y303 409 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 MEMO1Q9Y316 297 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 HSPB11Q9Y547 144 aa9.32□□□□□ -0.92
GGPS1-201ENST00000282841 LY86O95711 162 aa9.31□□□□□ -0.92
GGPS1-201ENST00000282841 ZNF44P15621 663 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms