RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PDZK1IP1Q13113 114 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 SRSF7Q16629 238 aaKnown RBP eCLIP11.16□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF774Q6NX45 483 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FOXRED2Q8IWF2 684 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM185AQ8N0U4 392 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 OR10AD1Q8NGE0 317 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 GLYATL2Q8WU03 294 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 KIRREL1Q96J84 757 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 GINS3Q9BRX5 216 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 LIME1Q9H400 295 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 ATPIF1Q9UII2 106 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 TP53TG5Q9Y2B4 290 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 TMED3Q9Y3Q3 217 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 NBASA2RRP1 2371 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 hCG_38984A0A1B0GV85 526 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 PQLC2LA1A4F0 135 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 XRCC2O43543 280 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 ANGPTL7O43827 346 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 PDCD6O75340 191 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 MBPP02686 304 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-201ENST00000277198 OR5AC1P0C628 307 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 DANCRP0C864 163 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF32P17041 273 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 PRKACAP17612 351 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 RCC1P18754 421 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-201ENST00000277198 GLP1RP43220 463 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 MALLQ13021 153 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 PEA15Q15121 130 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 AVPI1Q5T686 147 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 ABLIM2Q6H8Q1 611 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 Q6ZRG5 221 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 Q6ZS49 121 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 AAED1Q7RTV5 226 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 Q8NFD4 153 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 OR2AE1Q8NHA4 323 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 SPSB4Q96A44 273 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 ADAT1Q9BUB4 502 aaKnown RBP11.15□□□□□ -0.62
C9orf3-201ENST00000277198 SAV1Q9H4B6 383 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-201ENST00000277198 RNF122Q9H9V4 155 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 SLC2A9Q9NRM0 540 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 LUZP4Q9P127 313 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 FBXO9Q9UK97 447 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-201ENST00000277198 FAM96BQ9Y3D0 163 aa11.15□□□□□ -0.62
C9orf3-201ENST00000277198 STRAPQ9Y3F4 350 aaKnown RBP11.15□□□□□ -0.62
C9orf3-201ENST00000277198 LSM5Q9Y4Y9 91 aaKnown RBP11.15□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF816-ZNF321PA0A0X1KG74 233 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 SPRY1O43609 319 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-201ENST00000277198 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
C9orf3-201ENST00000277198 P04436 131 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 FOLR3P41439 243 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 HTR5AP47898 357 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 CCL11P51671 97 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 RRADP55042 308 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 PPP1R32Q7Z5V6 425 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 GGNQ86UU5 652 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 MSI2Q96DH6 328 aaKnown RBP11.14□□□□□ -0.63
C9orf3-201ENST00000277198 FOXB1Q99853 325 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 RSRP1Q9BUV0 290 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 OR2H1Q9GZK4 316 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 ST3GAL6Q9Y274 331 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 TNRC6AQ8NDV7 1962 aaKnown RBP11.14□□□□□ -0.63
C9orf3-201ENST00000277198 NCOA6Q14686 2063 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-201ENST00000277198 PRRC2CQ9Y520 2896 aaKnown RBP11.14□□□□□ -0.63
C9orf3-201ENST00000277198 GEMIN2O14893 280 aaKnown RBP11.14□□□□□ -0.63
C9orf3-201ENST00000277198 ST8SIA3O43173 380 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 SPP1P10451 314 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 CD80P33681 288 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 PSG4Q00888 419 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 HGFACQ04756 655 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 FBXL14Q8N1E6 418 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 WNT2BQ93097 391 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 TOMM40LQ969M1 308 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 ADGRG7Q96K78 797 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 PRDM14Q9GZV8 571 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
C9orf3-201ENST00000277198 IGKV1-12A0A0C4DH73 117 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 LINC01387J3KSC0 135 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 CDS2O95674 445 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 TSPAN15O95858 294 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 IGKV1D-12P01611 117 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 PLA2G2AP14555 144 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 FUT3P21217 361 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 OPRM1P35372 400 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 SNCAP37840 140 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 SLC22A25Q6T423 547 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 OR2V1Q8NHB1 315 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 OR14L1PQ8NHC6 308 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 ABHD14BQ96IU4 210 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 WNT5BQ9H1J7 359 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 PLA2G2EQ9NZK7 142 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 CACFD1Q9UGQ2 172 aa11.13□□□□□ -0.63
C9orf3-201ENST00000277198 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
C9orf3-201ENST00000277198 MEX3AA1L020 520 aaKnown RBP11.12□□□□□ -0.63
C9orf3-201ENST00000277198 IFNA4P05014 189 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms