RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 IGHV1-8P0DP01 117 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 EDDM3BP56851 147 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 CXCR4P61073 352 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 ESRRGP62508 458 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 ZNF273Q14593 569 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 SSX2Q16385 188 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 NSUN5P1Q3KNT7 163 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 SLX4IPQ5VYV7 408 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 ZNF322Q6U7Q0 402 aaPredicted RBP7.76□□□□□ -1.17
LRTM1-201ENST00000273286 Q6ZSR3 168 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 LHFPL4Q7Z7J7 247 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 ENTHD1Q8IYW4 607 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 WFDC9Q8NEX5 89 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 BBS1Q8NFJ9 593 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 CAPSLQ8WWF8 208 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 C10orf35Q96D05 121 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 NRBF2Q96F24 287 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 SNX22Q96L94 193 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 CEP19Q96LK0 163 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 MMP28Q9H239 520 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 GLS2Q9UI32 602 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 GTF2A1LQ9UNN4 478 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 LINC00312Q9Y6C7 94 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 R4GMQ9 66 aa7.76□□□□□ -1.17
LRTM1-201ENST00000273286 ZNF670-ZNF695F2Z2N8 137 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 PSMD9O00233 223 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 ZNF737O75373 536 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 CLIC3O95833 236 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 SERPINA3P01011 423 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 CD28P10747 220 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 PIPP12273 146 aaPredicted RBP7.75□□□□□ -1.17
LRTM1-201ENST00000273286 CCL1P22362 96 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 PEX2P28328 305 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 BRS3P32247 399 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 VDAC2P45880 294 aaPredicted RBP7.75□□□□□ -1.17
LRTM1-201ENST00000273286 FUT6P51993 359 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 CRISP1P54107 249 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 DLX6P56179 175 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 DYNC1I2Q13409 638 aaKnown RBP7.75□□□□□ -1.17
LRTM1-201ENST00000273286 ATP6AP1Q15904 470 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 NXNL2Q5VZ03 156 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 OR52W1Q6IF63 320 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 PYDC1Q8WXC3 89 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 CREB3L1Q96BA8 519 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 PHF21AQ96BD5 680 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 ZNF488Q96MN9 340 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 CITED2Q99967 270 aaPredicted RBP7.75□□□□□ -1.17
LRTM1-201ENST00000273286 PAPOLBQ9NRJ5 636 aaKnown RBP7.75□□□□□ -1.17
LRTM1-201ENST00000273286 GPR173Q9NS66 373 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 CLN6Q9NWW5 311 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 TVP23BQ9NYZ1 205 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 ENOPH1Q9UHY7 261 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 OR52A1Q9UKL2 312 aa7.75□□□□□ -1.17
LRTM1-201ENST00000273286 FUOMA2VDF0 154 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 CCDC182A6NF36 153 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 ANKRD65E5RJM6 399 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 SRSF10O75494 262 aaKnown RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 CYB5AP00167 134 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 KRT8P05787 483 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 MRPL3P09001 348 aaKnown RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 HTR1DP28221 377 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 CEBPDP49716 269 aaPredicted RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 HCCSP53701 268 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 ACTA2P62736 377 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 ACTG2P63267 376 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 ACTC1P68032 377 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 ACTA1P68133 377 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 SLC35A2P78381 396 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 MFGE8Q08431 387 aaPredicted RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 DCTN2Q13561 401 aaKnown RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 HABP2Q14520 560 aaPredicted RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 DMRTC1Q5HYR2 192 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 HIST2H2BDQ6DRA6 164 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 CCBE1Q6UXH8 406 aaPredicted RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 MEPCEQ7L2J0 689 aaKnown RBP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 TMEM179BQ7Z7N9 219 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 RTN4RL2Q86UN3 420 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 GID4Q8IVV7 300 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 ZNF676Q8N7Q3 588 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 PP6455Q8WZ26 134 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 BORCS8Q96FH0 119 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 OSBPL10Q9BXB5 764 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 CLEC7AQ9BXN2 247 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 GPR61Q9BZJ8 451 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 GAL3ST2Q9H3Q3 398 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 S100A14Q9HCY8 104 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.74□□□□□ -1.17
LRTM1-201ENST00000273286 COPS3Q9UNS2 423 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 SESN1Q9Y6P5 492 aa7.74□□□□□ -1.17
LRTM1-201ENST00000273286 IGHV2-26A0A0B4J1V2 119 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 A0A1B0GTI1 187 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 FAM90A22PA8MWA6 464 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 PRB2P02812 416 aaPredicted RBP7.73□□□□□ -1.17
LRTM1-201ENST00000273286 PF4V1P10720 104 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 MALP21145 153 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 PRKACGP22612 351 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 PAX6P26367 422 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 ERP29P30040 261 aaKnown RBP7.73□□□□□ -1.17
LRTM1-201ENST00000273286 CEACAM3P40198 252 aa7.73□□□□□ -1.17
LRTM1-201ENST00000273286 RAB13P51153 203 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms