RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MPIG6BO95866 241 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 UBBP0CG47 229 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 SLC2A2P11168 524 aaPredicted RBP10.51□□□□□ -0.73
SS18-202ENST00000269138 PSMD7P51665 324 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 EDDM3BP56851 147 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 RPL31P62899 125 aaKnown RBP10.51□□□□□ -0.73
SS18-202ENST00000269138 MXD1Q05195 221 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 PLA2G7Q13093 441 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 UNC119Q13432 240 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 GDPD3Q7L5L3 318 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 BPIFB2Q8N4F0 458 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 CHST4Q8NCG5 386 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 OR51D1Q8NGF3 324 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 OR5D13Q8NGL4 314 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 MRI1Q9BV20 369 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 NAA50Q9GZZ1 169 aaKnown RBP10.51□□□□□ -0.73
SS18-202ENST00000269138 ING3Q9NXR8 418 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 ONECUT1Q9UBC0 465 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 TRBV23-1A0A0A0MS06 115 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 IFITM5A6NNB3 132 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 TMEM14DPA8MWL7 114 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 MGST3O14880 152 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 BPNT1O95861 308 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 LIPFP07098 398 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 MMP9P14780 707 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 ARSBP15848 533 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 DLX1P56177 255 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 PRB3Q04118 309 aaPredicted RBP10.5□□□□□ -0.73
SS18-202ENST00000269138 ZNF273Q14593 569 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 ATXN7L3Q14CW9 347 aaPredicted RBP10.5□□□□□ -0.73
SS18-202ENST00000269138 C2orf76Q3KRA6 126 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 PAN3Q58A45 887 aaKnown RBP10.5□□□□□ -0.73
SS18-202ENST00000269138 GDPGP1Q6ZNW5 385 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 SUMF2Q8NBJ7 301 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 FAM3DQ96BQ1 224 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 MRPS24Q96EL2 167 aaKnown RBP10.5□□□□□ -0.73
SS18-202ENST00000269138 COQ2Q96H96 371 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 Q96M66 194 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 TBX15Q96SF7 602 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 PCGF1Q9BSM1 259 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 SIRPDQ9H106 197 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 STEAP1Q9UHE8 339 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 CDC42EP3Q9UKI2 254 aa10.5□□□□□ -0.73
SS18-202ENST00000269138 IGHV3OR16-10A0A075B7F0 116 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 TOX4O94842 621 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 CCL3L1P16619 93 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 HNF1AP20823 631 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 SRP14P37108 136 aaKnown RBP10.49□□□□□ -0.73
SS18-202ENST00000269138 GLIPR1P48060 266 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 ERVFRD-1P60508 538 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 AESQ08117 197 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 MPV17LQ2QL34 196 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 TIMM50Q3ZCQ8 353 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 CHRFAM7AQ494W8 412 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 KLF17Q5JT82 389 aaPredicted RBP10.49□□□□□ -0.73
SS18-202ENST00000269138 ATAD3CQ5T2N8 411 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 SIGIRRQ6IA17 410 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 SLC16A12Q6ZSM3 486 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 TCF23Q7RTU1 214 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 TPRA1Q86W33 373 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 Q8N7P7 452 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 KCNG3Q8TAE7 436 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 PPP1R35Q8TAP8 253 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 PLPPR1Q8TBJ4 325 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 WDFY2Q96P53 400 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 NICN1Q9BSH3 213 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
SS18-202ENST00000269138 CST11Q9H112 138 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 IFT22Q9H7X7 185 aa10.49□□□□□ -0.73
SS18-202ENST00000269138 A0A0A6YYD4 124 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 TMEM272A0A1B0GTI8 110 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 NOTOA8MTQ0 251 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 AIPO00170 330 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 LDLRAD4O15165 306 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 FSHBP01225 129 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 IGHV4-38-2P0DP08 117 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 CFPP27918 469 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 P2RX3P56373 397 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 NCS1P62166 190 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 RPS27AP62979 156 aaKnown RBP10.48□□□□□ -0.73
SS18-202ENST00000269138 GPR107Q5VW38 600 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 LINC00596Q86U02 117 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 RTN4RL2Q86UN3 420 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 UPRTQ96BW1 309 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 TMEM59Q9BXS4 323 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 LPAR3Q9UBY5 353 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 KPTNQ9Y664 436 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 SVEP1Q4LDE5 3571 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
SS18-202ENST00000269138 SETD2Q9BYW2 2564 aaPredicted RBP10.48□□□□□ -0.73
SS18-202ENST00000269138 CSN2P05814 226 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 HOXB4P17483 251 aaPredicted RBP10.48□□□□□ -0.73
SS18-202ENST00000269138 SRD5A1P18405 259 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 ERP29P30040 261 aaKnown RBP10.48□□□□□ -0.73
SS18-202ENST00000269138 EFNB2P52799 333 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 DLX6P56179 175 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 VBP1P61758 197 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 KRBOX4Q5JUW0 171 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 METTL11BQ5VVY1 283 aa10.48□□□□□ -0.73
SS18-202ENST00000269138 RAB12Q6IQ22 244 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms