RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 SLC31A2O15432 143 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 H3F3AP84243 136 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 NHLRC3Q5JS37 347 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 OR2M7Q8NG81 312 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 OR4C5Q8NGB2 326 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 OR1S1Q8NH92 325 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 MALSU1Q96EH3 234 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 RAB18Q9NP72 206 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 UBE2J1Q9Y385 318 aaPredicted RBP14.21□□□□□ -0.14
CTCF-201ENST00000264010 M0R143 59 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 ARR3P36575 388 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 UBE2V2Q15819 145 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 WDFY1Q8IWB7 410 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 TMEM178AQ8NBL3 297 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 PRSS12P56730 875 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 HIST3H3Q16695 136 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 RIPPLY2Q5TAB7 128 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 TMEM217Q8N7C4 229 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 C2orf50Q96LR7 162 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 TRIOO75962 3097 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 C20orf202A1L168 122 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 EFSO43281 561 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 CSRP1P21291 193 aaKnown RBP14.2□□□□□ -0.14
CTCF-201ENST00000264010 DHODHQ02127 395 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 TGFBR3Q03167 851 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 SLC25A26Q70HW3 274 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 THNSL2Q86YJ6 484 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 EXTL1Q92935 676 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 FAAP24Q9BTP7 215 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 OR51B6Q9H340 312 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 CDH20Q9HBT6 801 aa14.2□□□□□ -0.14
CTCF-201ENST00000264010 A0A0G2JMM0 328 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 A0A1W2PPB8 328 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 A0A1W2PRS3 328 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 FIGNL2A6NMB9 653 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 KIR3DP1A8MWS1 328 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 GEMIN2O14893 280 aaKnown RBP14.19□□□□□ -0.14
CTCF-201ENST00000264010 MBPP02686 304 aaPredicted RBP14.19□□□□□ -0.14
CTCF-201ENST00000264010 RFPL3SP0C7P2 107 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 CD37P11049 281 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 GLRA1P23415 457 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 GNRHRP30968 328 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 SUMF1Q8NBK3 374 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 PACRGQ96M98 296 aaPredicted RBP14.19□□□□□ -0.14
CTCF-201ENST00000264010 MSL2Q9HCI7 577 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 NXPH3O95157 252 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 HPNP05981 417 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 ZNF735P0CB33 412 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 PSG4Q00888 419 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 TESK1Q15569 626 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 DYRK2Q92630 601 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 SLC5A7Q9GZV3 580 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 OPN3Q9H1Y3 402 aaPredicted RBP14.19□□□□□ -0.14
CTCF-201ENST00000264010 DHRS7CA6NNS2 312 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 CLN5O75503 358 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 TK1P04183 234 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 SNAI3Q3KNW1 292 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 DCAF10Q5QP82 559 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 BIVMQ86UB2 503 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 LOXL4Q96JB6 756 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 CABLES2Q9BTV7 478 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 DEFB127Q9H1M4 99 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 PRO3102Q9H379 93 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 V9GYS6 101 aa14.19□□□□□ -0.14
CTCF-201ENST00000264010 SLC25A4P12235 298 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 ZNF16P17020 682 aaPredicted RBP14.18□□□□□ -0.14
CTCF-201ENST00000264010 ASCL1P50553 236 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 DBX2Q6ZNG2 339 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 TMEM182Q6ZP80 229 aaPredicted RBP14.18□□□□□ -0.14
CTCF-201ENST00000264010 C12orf49Q9H741 205 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 R4GN57 208 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 FAM221AA4D161 298 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 ZNF729A6NN14 1252 aaPredicted RBP14.18□□□□□ -0.14
CTCF-201ENST00000264010 MFNGO00587 321 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 SP9P0CG40 484 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 TSPO2Q5TGU0 170 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 CLEC18BQ6UXF7 455 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 APOBEC3DQ96AK3 386 aaPredicted RBP14.18□□□□□ -0.14
CTCF-201ENST00000264010 HEXA-AS1Q9H8Q6 139 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 PNRC2Q9NPJ4 139 aaKnown RBP14.18□□□□□ -0.14
CTCF-201ENST00000264010 HSF4Q9ULV5 492 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 FGF2P09038 288 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 PLAC9Q5JTB6 97 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 TOMM20LQ6UXN7 152 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.18□□□□□ -0.14
CTCF-201ENST00000264010 TREM2Q9NZC2 230 aa14.18□□□□□ -0.14
CTCF-201ENST00000264010 A0A1W2PPQ1 181 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 CRHP06850 196 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 MEOX1P50221 254 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 CLN3Q13286 438 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 IKZF1Q13422 519 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 RNPS1Q15287 305 aaKnown RBP14.17□□□□□ -0.14
CTCF-201ENST00000264010 MIDNQ504T8 468 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 HES3Q5TGS1 186 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 TMEM268Q5VZI3 342 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 BATF2Q8N1L9 274 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 SCGB1C1Q8TD33 95 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 CBLN4Q9NTU7 201 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 GPR132Q9UNW8 380 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 HLA-HP01893 362 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms