RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 GLRXP35754 106 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 SURF2Q15527 256 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-201ENST00000263559 MPPED2Q15777 294 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 C5orf24Q7Z6I8 188 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 DPCDQ9BVM2 203 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-201ENST00000263559 IFT22Q9H7X7 185 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 Q9N2K0 584 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 CHD3Q12873 2000 aaKnown RBP13.39□□□□□ -0.27
VPS26A-201ENST00000263559 A0A1B0GWJ7 208 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 NXPH2O95156 264 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 DUS4LO95620 317 aaKnown RBP13.39□□□□□ -0.27
VPS26A-201ENST00000263559 PGAM2P15259 253 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 SPERTQ8NA61 448 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 RND1Q92730 232 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 PHB2Q99623 299 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 DECR2Q9NUI1 292 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 SLC23A1Q9UHI7 598 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 SHANK1Q9Y566 2161 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 ACAA1P09110 424 aaPredicted RBP13.38□□□□□ -0.27
VPS26A-201ENST00000263559 C1QTNF12Q5T7M4 302 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 POC1AQ8NBT0 407 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 GTF3AQ92664 365 aaKnown RBP13.38□□□□□ -0.27
VPS26A-201ENST00000263559 DMRTA2Q96SC8 542 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 VKORC1Q9BQB6 163 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 TRGV8A0A0C4DH27 118 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 IGHV3-13P01766 116 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 PPP3CBP16298 524 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 CD40P25942 277 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 FCGR2CP31995 323 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 SUPT4H1P63272 117 aaKnown RBP13.38□□□□□ -0.27
VPS26A-201ENST00000263559 HOXA4Q00056 320 aaPredicted RBP13.38□□□□□ -0.27
VPS26A-201ENST00000263559 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
VPS26A-201ENST00000263559 IGSF11Q5DX21 431 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 C20orf204Q6ZNR8 217 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 Q6ZS49 121 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 TMEM171Q8WVE6 324 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 TLNRD1Q9H1K6 362 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 UFSP2Q9NUQ7 469 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 NCOR2Q9Y618 2525 aa13.38□□□□□ -0.27
VPS26A-201ENST00000263559 A6NLC8 198 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 SIRPB1O00241 398 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 CCSO14618 274 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 NOS1APO75052 506 aaPredicted RBP13.37□□□□□ -0.27
VPS26A-201ENST00000263559 SFT2D2O95562 160 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 OR2H2O95918 312 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 KNG1P01042 644 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 GLAP06280 429 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 ECI1P42126 302 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 RBM39Q14498 530 aaKnown RBP13.37□□□□□ -0.27
VPS26A-201ENST00000263559 ZNF146Q15072 292 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 LGALSLQ3ZCW2 172 aaPredicted RBP13.37□□□□□ -0.27
VPS26A-201ENST00000263559 CLEC18BQ6UXF7 455 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 KCTD9Q7L273 389 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 ASCC1Q8N9N2 400 aaKnown RBP13.37□□□□□ -0.27
VPS26A-201ENST00000263559 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 OR5M8Q8NGP6 311 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 SYT3Q9BQG1 590 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 HES4Q9HCC6 221 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 WNT9BO14905 357 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 RGS13O14921 159 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 SLC34A2O95436 690 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 SLC9A3R2Q15599 337 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 WDR82Q6UXN9 313 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 UNQ6494/PRO21346Q6UXR6 183 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 MRPL30Q8TCC3 161 aaKnown RBP13.37□□□□□ -0.27
VPS26A-201ENST00000263559 USB1Q9BQ65 265 aaKnown RBP13.37□□□□□ -0.27
VPS26A-201ENST00000263559 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
VPS26A-201ENST00000263559 CHD8Q9HCK8 2581 aa13.37□□□□□ -0.27
VPS26A-201ENST00000263559 SCTP09683 121 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 RBMXP38159 391 aaKnown RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 KLF3P57682 345 aaPredicted RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 TOMM40LQ969M1 308 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 RIMS4Q9H426 269 aaPredicted RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 MEMO1Q9Y316 297 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 SLC33A1O00400 549 aaPredicted RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 RPS2P15880 293 aaKnown RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 HLA-GP17693 338 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 WFDC8Q8IUA0 241 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 ZCCHC14Q8WYQ9 949 aaKnown RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 FXYD6Q9H0Q3 95 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 SLA2Q9H6Q3 261 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 PRR13Q9NZ81 148 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 ZSCAN5BA6NJL1 495 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 DBX1A6NMT0 343 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 SH2D1BO14796 132 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 THBDP07204 575 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 CTSDP07339 412 aaPredicted RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 NFYAP23511 347 aaPredicted RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 FXYD4P59646 89 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 PAN3Q58A45 887 aaKnown RBP13.36□□□□□ -0.27
VPS26A-201ENST00000263559 SPIN3Q5JUX0 258 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
VPS26A-201ENST00000263559 IGLV3-9A0A075B6K5 115 aa13.35□□□□□ -0.27
VPS26A-201ENST00000263559 ZNF728P0DKX0 622 aa13.35□□□□□ -0.27
VPS26A-201ENST00000263559 GLP1RP43220 463 aa13.35□□□□□ -0.27
VPS26A-201ENST00000263559 CEBPDP49716 269 aaPredicted RBP13.35□□□□□ -0.27
VPS26A-201ENST00000263559 TMEM108Q6UXF1 575 aa13.35□□□□□ -0.27
VPS26A-201ENST00000263559 SEC22AQ96IW7 307 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms