RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TBC1D26Q86UD7 250 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 GAPTQ8N292 157 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 SPEM1Q8N4L4 309 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 UBAC2Q8NBM4 344 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 DMBX1Q8NFW5 382 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 OR51H1Q8NH63 302 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 SAP25Q8TEE9 199 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 RNF138Q8WVD3 245 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 FOXB1Q99853 325 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 IFT22Q9H7X7 185 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 TMEM38BQ9NVV0 291 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 ATPIF1Q9UII2 106 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 COL5A1P20908 1838 aaPredicted RBP7.87□□□□□ -1.15
MSH4-201ENST00000263187 IGKV1D-13A0A0B4J2D9 117 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 C3orf85A0A1B0GTC6 90 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 A0A1W2PR80 420 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 PRSS44E7EML9 344 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 GPR137BO60478 399 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 YIF1AO95070 293 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 PPYP01298 95 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 IGKV1-13P0DP09 117 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 EDN3P14138 238 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 CRYGSP22914 178 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 CTSSP25774 331 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 OTX1P32242 354 aaPredicted RBP7.87□□□□□ -1.15
MSH4-201ENST00000263187 RPS10P46783 165 aaKnown RBP7.87□□□□□ -1.15
MSH4-201ENST00000263187 ZNF154Q13106 437 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 CNN3Q15417 329 aaKnown RBP7.87□□□□□ -1.15
MSH4-201ENST00000263187 C3AR1Q16581 482 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 LGI3Q8N145 548 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 OR56B2PQ8NGI1 322 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 OR5C1Q8NGR4 320 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 TMEM171Q8WVE6 324 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 RDH5Q92781 318 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 WNT5BQ9H1J7 359 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 CALHM2Q9HA72 323 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 BCO1Q9HAY6 547 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 TIMM10BQ9Y5J6 103 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 LIPGQ9Y5X9 500 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 KPTNQ9Y664 436 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 C5orf49A4QMS7 147 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 PINLYPA6NC86 204 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 ZNF724A8MTY0 619 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 NUDT19A8MXV4 375 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 H0YL77 283 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 K7ESF4 209 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 TERTO14746 1132 aaKnown RBP7.87□□□□□ -1.15
MSH4-201ENST00000263187 PDGFBP01127 241 aaPredicted RBP7.87□□□□□ -1.15
MSH4-201ENST00000263187 APOC1P02654 83 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 CELA3AP09093 270 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 ZNF16P17020 682 aaPredicted RBP7.87□□□□□ -1.15
MSH4-201ENST00000263187 ATP6V0CP27449 155 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 GDF1P27539 372 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 ALDH3B1P43353 468 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 RAB35Q15286 201 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 ZNF818PQ6ZRF7 136 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 EXTL1Q92935 676 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 HES7Q9BYE0 225 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 PLEKHA2Q9HB19 425 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 CCL28Q9NRJ3 127 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 STARD10Q9Y365 291 aa7.87□□□□□ -1.15
MSH4-201ENST00000263187 C9J4A7 227 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 MPPED1O15442 326 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 P04436 131 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 S100A9P06702 114 aaKnown RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 P2RY1P47900 373 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 CLDN15P56746 228 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 RAC1P63000 192 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 MRPS34P82930 218 aaKnown RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 SOHLH1Q5JUK2 328 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 SPATA46Q5T0L3 261 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 SUMF2Q8NBJ7 301 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 IMMP1LQ96LU5 166 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 ANGPTL4Q9BY76 406 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 OR2H1Q9GZK4 316 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 DEPPQ9NTK1 212 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 PDCD6O75340 191 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 TMEM50AO95807 157 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 NGFP01138 241 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 RAB5AP20339 215 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 MDKP21741 143 aaPredicted RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 NKX2-1P43699 371 aaPredicted RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 DYNLT3P51808 116 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 RPS16P62249 146 aaKnown RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 VAMP2P63027 116 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 HOXA4Q00056 320 aaPredicted RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 OR2C3Q8N628 320 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 SPSB1Q96BD6 273 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 C18orf12Q96KH6 178 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 SYT3Q9BQG1 590 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 CEP250Q9BV73 2442 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 WRBO00258 174 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 CBR3O75828 277 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 VAMP5O95183 116 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 GAPDHP04406 335 aaKnown RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 NR2C1P13056 603 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 TMEM267Q0VDI3 215 aaPredicted RBP7.86□□□□□ -1.15
MSH4-201ENST00000263187 SLC25A24Q6NUK1 477 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 HPSE2Q8WWQ2 592 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 GLRX2Q9NS18 164 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms