RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CBLN4Q9NTU7 201 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 SYNGR1O43759 233 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 RHBDL1O75783 438 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 SNRPBP14678 240 aaKnown RBP23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 ATP1B3P54709 279 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 ZP1P60852 638 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 TNFAIP6P98066 277 aaPredicted RBP23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 PLA2G7Q13093 441 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 TNFAIP8L1Q8WVP5 186 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 OR51I2Q9H344 312 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 CYSLTR2Q9NS75 346 aa23.26■■□□□ 1.31
SMARCD3-201ENST00000262188 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 LGALS8O00214 317 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 CALCBP10092 127 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 OR10K1Q8NGX5 313 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 ACOT12Q8WYK0 555 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 SLC25A28Q96A46 364 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 MEGF10Q96KG7 1140 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 ZNF488Q96MN9 340 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 C7orf50Q9BRJ6 194 aaKnown RBP23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 OR5B21A6NL26 309 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 SLC17A2O00624 439 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 CDIPTO14735 213 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 CXCL3P19876 107 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 PVALBP20472 110 aaPredicted RBP23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 HTR2CP28335 458 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 CDKN1AP38936 164 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 OR10K2Q6IF99 312 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 FAM166AQ6J272 317 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 SLC25A26Q70HW3 274 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 SCCPDHQ8NBX0 429 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 SEBOXQ9HB31 216 aaPredicted RBP23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 DSCAMO60469 2012 aa23.25■■□□□ 1.31
SMARCD3-201ENST00000262188 IGKV1-12A0A0C4DH73 117 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 L7N2F9 121 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 IGKV1D-12P01611 117 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 TMEM225BP0DP42 221 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 CD37P11049 281 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 GMFBP60983 142 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 RAB11BQ15907 218 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 C1orf100Q5SVJ3 147 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 UQCC3Q6UW78 93 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 DTX2Q86UW9 622 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 C11orf53Q8IXP5 236 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 OR51D1Q8NGF3 324 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 OR2T35Q8NGX2 323 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 TMEM68Q96MH6 324 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 CACNG6Q9BXT2 260 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 SLC25A32Q9H2D1 315 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 NIT2Q9NQR4 276 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 ZDHHC8Q9ULC8 765 aa23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 MRPS28Q9Y2Q9 187 aaKnown RBP23.24■■□□□ 1.31
SMARCD3-201ENST00000262188 A0A1W2PP11 408 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 A6NLC8 198 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 PTGFRP43088 359 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 KRTAP10-9P60411 292 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 RAB4BP61018 213 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 TSPAN5P62079 268 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 AWAT2Q6E213 333 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 NKIRAS2Q9NYR9 191 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 GOSR1O95249 250 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 PDZK1IP1Q13113 114 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 AVPI1Q5T686 147 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 DHRS7BQ6IAN0 325 aaPredicted RBP23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 GLIPR1L1Q6UWM5 242 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 SLAMF9Q96A28 289 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 ELL3Q9HB65 397 aaPredicted RBP23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 STEAP1Q9UHE8 339 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 PTPN13Q12923 2485 aa23.23■■□□□ 1.31
SMARCD3-201ENST00000262188 F8VVB4 439 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 F8VWA3 439 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 G3V3Q6 166 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 RP2O75695 350 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 LY6HO94772 140 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 CD200P41217 278 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 MOGAT3Q86VF5 341 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 OR1S1Q8NH92 325 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 MIOXQ9UGB7 285 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 DMRT1Q9Y5R6 373 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 USF3Q68DE3 2245 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 CSMD2Q7Z408 3487 aa23.22■■□□□ 1.31
SMARCD3-201ENST00000262188 TEX46H3BTG2 121 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 PRAF2O60831 178 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 PMELP40967 661 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 NPBWR2P48146 333 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 DEFA5Q01523 94 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 LGALS14Q8TCE9 139 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 FAM46BQ96A09 425 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 FOXRED1Q96CU9 486 aaPredicted RBP23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 C1orf147Q96MC9 270 aaPredicted RBP23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 MS4A5Q9H3V2 200 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 EXTL2Q9UBQ6 330 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 LRP5LA4QPB2 252 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 HPXP02790 462 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 ZNF573Q86YE8 665 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 OR51F2Q8NH61 342 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 AQP3Q92482 292 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 ABCG5Q9H222 651 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 COMMD3Q9UBI1 195 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 OR5V1Q9UGF6 321 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms