RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SPACA5Q96QH8 159 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 DCAF16Q9NXF7 216 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF814B7Z6K7 855 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 OPN1LWP04000 364 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 JMJD7P0C870 316 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 SP9P0CG40 484 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 TCN2P20062 427 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 OTX2P32243 289 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 ERVFRD-1P60508 538 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 RAC3P60763 192 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 RND3P61587 244 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 OR2T2Q6IF00 324 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 DMRTC2Q8IXT2 367 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 BEND2Q8NDZ0 799 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 OR10AD1Q8NGE0 317 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 CT55Q8WUE5 264 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 JSRP1Q96MG2 331 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 NOL4LQ96MY1 436 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 NIPSNAP3BQ9BS92 247 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 COL27A1Q8IZC6 1860 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 DVL1O14640 695 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 CYB5BO43169 146 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 DHHO43323 396 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 TRGC2P03986 189 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF121P58317 390 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 TMEM164Q5U3C3 297 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 CLEC9AQ6UXN8 241 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 LIAT1Q6ZQX7 453 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 ABHD12BQ7Z5M8 362 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 LGI3Q8N145 548 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF283Q8N7M2 679 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 OR8B12Q8NGG6 310 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 RNASEH2CQ8TDP1 164 aaKnown RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 C10orf35Q96D05 121 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 RBMXL1Q96E39 390 aaKnown RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 NEU1Q99519 415 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 SYT3Q9BQG1 590 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 GPR87Q9BY21 358 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 ARRDC1-AS1Q9H2J1 176 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 PNRC2Q9NPJ4 139 aaKnown RBP9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 GPR84Q9NQS5 396 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 ANXA10Q9UJ72 324 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 ALPK2Q86TB3 2170 aa9.37□□□□□ -0.91
CHRNA1-201ENST00000261007 TGIF2-C20orf24A0A0A6YYL0 155 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 FAM230AA0A1W2PPH8 454 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 SMCO3A2RU48 225 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 C21orf140B9A014 251 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 HSPA12AO43301 675 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 TRGC1P0CF51 173 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 CDAP32320 146 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 RND2P52198 227 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 PIGPP57054 158 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 NHLH2Q02577 135 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 GNMTQ14749 295 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 DPPA3Q6W0C5 159 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 FBXW12Q6X9E4 464 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 TMEM123Q8N131 208 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 OR14K1Q8NGZ2 314 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 OR2G3Q8NGZ4 309 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 SLC25A31Q9H0C2 315 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 PPP1R14DQ9NXH3 145 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 ABI3Q9P2A4 366 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 HSF4Q9ULV5 492 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 CACNA1CQ13936 2221 aa9.36□□□□□ -0.91
CHRNA1-201ENST00000261007 IGKV1-9A0A0C4DH69 117 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 A0A0U1RQV5 110 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 DHRS7CA6NNS2 312 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 PITX3O75364 302 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 HBE1P02100 147 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF728P0DKX0 622 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 OR5H8P0DN80 308 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 FABP4P15090 132 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 FGF7P21781 194 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 CYB561P49447 251 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 HIST1H3AP68431 136 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 CCL20P78556 96 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 MRPS34P82930 218 aaKnown RBP9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 EWSR1Q01844 656 aaKnown RBP eCLIP9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 PNRC1Q12796 327 aaPredicted RBP9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 MFAP5Q13361 173 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 ICAM4Q14773 271 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 JOSD1Q15040 202 aaPredicted RBP9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 KISS1Q15726 138 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 AKR1C8PQ5T2L2 129 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 GFI1BQ5VTD9 330 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 TCEAL6Q6IPX3 200 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 COMMD2Q86X83 199 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 C20orf196Q8IYI0 205 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 C1orf87Q8N0U7 546 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 OR4D5Q8NGN0 318 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 OR14L1PQ8NHC6 308 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 ABHD5Q8WTS1 349 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 BOD1Q96IK1 185 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 FAM210BQ96KR6 192 aa9.35□□□□□ -0.91
CHRNA1-201ENST00000261007 PACRGQ96M98 296 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms