RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CHST4Q8NCG5 386 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 OR10R2Q8NGX6 335 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 PRRC2AP48634 2157 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 IGHV4-61A0A0C4DH41 118 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 NKX6-3A6NJ46 265 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM25AB3EWG3 89 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM25CB3EWG5 89 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM25GB3EWG6 89 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 PDCD6O75340 191 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 FUT3P21217 361 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 IL13RA1P78552 427 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 CBX3Q13185 183 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 RAB12Q6IQ22 244 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 SLC36A1Q7Z2H8 476 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 C6orf201Q7Z4U5 140 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 IZUMO1Q8IYV9 350 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 FGFRL1Q8N441 504 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 BPIFB2Q8N4F0 458 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 OR6Q1Q8NGQ2 317 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 CLDND2Q8NHS1 167 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 S100A16Q96FQ6 103 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 ARHGAP5-AS1Q96IT6 56 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 CHST6Q9GZX3 395 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 SHARPINQ9H0F6 387 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 PATZ1Q9HBE1 687 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 PEX16Q9Y5Y5 336 aa13.15□□□□□ -0.3
CCDC90B-201ENST00000260054 WNT2P09544 360 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 SLC25A16P16260 332 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 TNFSF8P32971 234 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 OR3A1P47881 315 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 MADCAM1Q13477 382 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 SHEQ5VZ18 495 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 Q6ZTK2 550 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 OR4S1Q8NGB4 309 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 OR4M1Q8NGD0 313 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 PHF21AQ96BD5 680 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 RAB3CQ96E17 227 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 MED30Q96HR3 178 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 Q96MF0 132 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 WDFY2Q96P53 400 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 NEDD4LQ96PU5 975 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 DPCDQ9BVM2 203 aaPredicted RBP13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 PPA2Q9H2U2 334 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 ZMAT3Q9HA38 289 aaKnown RBP13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 SPACA1Q9HBV2 294 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 MIOXQ9UGB7 285 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 PCDHB10Q9UN67 800 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 KCNK7Q9Y2U2 307 aa13.15□□□□□ -0.31
CCDC90B-201ENST00000260054 F5H0A9 414 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 K7N7A8 449 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 ATP6V1G1O75348 118 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 SCGNO76038 276 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 TK1P04183 234 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 SEC61A1P61619 476 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 LMO4P61968 165 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 PAN3Q58A45 887 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 CNIH2Q6PI25 160 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 TMEM185AQ8NFB2 350 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 CHPT1Q8WUD6 406 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 SNX22Q96L94 193 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 SULT4A1Q9BR01 284 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 NUDT16L1Q9BRJ7 211 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 PECRQ9BY49 303 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 PLEKHJ1Q9NW61 149 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 EXTL2Q9UBQ6 330 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 ADAM30Q9UKF2 790 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 PAIP2BQ9ULR5 123 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 HSF4Q9ULV5 492 aa13.14□□□□□ -0.31
CCDC90B-201ENST00000260054 TRAV18A0A075B6X5 111 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 A0A096LNT2 108 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 A6NJ64 397 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 MFNGO00587 321 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 DVL1O14640 695 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 XRCC3O43542 346 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 IGHV2-5P01817 119 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 HIST1H1DP16402 221 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 GNB3P16520 340 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 S100A5P33763 92 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 TMEM69Q5SWH9 247 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 OLFML2AQ68BL7 652 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 OR8B3Q8NGG8 313 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 DYRK2Q92630 601 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 NEIL1Q96FI4 390 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 DIRAS2Q96HU8 199 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 OR8B2Q96RD0 313 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 FAAP24Q9BTP7 215 aa13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 ELF5Q9UKW6 265 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-201ENST00000260054 UBE2QL1A1L167 161 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 MCRIP1C9JLW8 97 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 IL2RGP31785 369 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 TAS2R20P59543 309 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 ATXN7L3Q14CW9 347 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 GRK1Q15835 563 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 CDNFQ49AH0 187 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms