RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 BCL7BQ9BQE9 202 aa3.54□□□□□ -1.84
RNF38-201ENST00000259605 CTDSP1Q9GZU7 261 aa3.54□□□□□ -1.84
RNF38-201ENST00000259605 MED9Q9NWA0 146 aa3.54□□□□□ -1.84
RNF38-201ENST00000259605 METTL1Q9UBP6 276 aaKnown RBP3.54□□□□□ -1.84
RNF38-201ENST00000259605 PURGQ9UJV8 347 aaKnown RBP3.54□□□□□ -1.84
RNF38-201ENST00000259605 TCRBV16S1A1N1A0A5B0 115 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 TMEM200CA6NKL6 621 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 OGG1O15527 345 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 LIMS3P0CW19 117 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 LIMS4P0CW20 117 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PRDX2P32119 198 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 CD80P33681 288 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 RPL35P42766 123 aaKnown RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 CD83Q01151 205 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 CIRBPQ14011 172 aaKnown RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 ATP6V1FQ16864 119 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 KIRREL2Q6UWL6 708 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 BIVMQ86UB2 503 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 C5orf17Q8NAS9 161 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 OR9Q2Q8NGE9 314 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 MRPL30Q8TCC3 161 aaKnown RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 SNRNP40Q96DI7 357 aaKnown RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 SLC25A38Q96DW6 304 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 COX14Q96I36 57 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 OR2M2Q96R28 347 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ALKBH7Q9BT30 221 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 TGIF2Q9GZN2 237 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ZNF385DQ9H6B1 395 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 B9D1Q9UPM9 204 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ZDBF2Q9HCK1 2354 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PIK3C2AO00443 1686 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 USP54Q70EL1 1684 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 AKAP12Q02952 1782 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PSMB11A5LHX3 300 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 IL6RP08887 468 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 COX5BP10606 129 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 MGMTP16455 207 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 FCGR2CP31995 323 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ETV4P43268 484 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 CDX1P47902 265 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 FAM3AP98173 230 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ZNF117Q03924 483 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ENDOGQ14249 297 aaKnown RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 SLC17A1Q14916 467 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 NSUN5P2Q63ZY6 315 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 COLCA1Q6ZS62 124 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 RPS27LQ71UM5 84 aaKnown RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 BAGE3Q86Y29 109 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 BAGE2Q86Y30 109 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 COMMD1Q8N668 190 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 SIGLEC11Q96RL6 698 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PAXXQ9BUH6 204 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 TMEM106BQ9NUM4 274 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 NUMA1Q14980 2115 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 KNDC1Q76NI1 1749 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 A0A1W2PQF6 199 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 RAB19A4D1S5 217 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 MFSD2BA6NFX1 497 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 UPK1AO00322 258 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PDCD6O75340 191 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 DEDDO75618 318 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 SNAPINO95295 136 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ISG15P05161 165 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PRSS1P07477 247 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 MGPP08493 103 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PTBP1P26599 531 aaKnown RBP eCLIP3.53□□□□□ -1.84
RNF38-201ENST00000259605 CD1BP29016 333 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 CDKN1AP38936 164 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 CA7P43166 264 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 SPCS3P61009 180 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 TOR2AQ5JU69 321 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 SPANXN1Q5VSR9 72 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 FAM53AQ6NSI3 398 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 Q6ZT83 130 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 SYS1Q8N2H4 156 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 OR9G4Q8NGQ1 327 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PRSS3P2Q8NHM4 247 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 RXFP4Q8TDU9 374 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 CCL13Q99616 98 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 EBF4Q9BQW3 602 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ZNF2Q9BSG1 426 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 UBQLN3Q9H347 655 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 GORASP2Q9H8Y8 452 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 SH2D2AQ9NP31 389 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 AKIP1Q9NQ31 210 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 SIRT7Q9NRC8 400 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 TMEM167BQ9NRX6 74 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 FOXJ2Q9P0K8 574 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ZNF107Q9UII5 783 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 DOT1LQ8TEK3 1739 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 SPEF2Q9C093 1822 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 IGHV3OR16-10A0A075B7F0 116 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ARRDC5A6NEK1 342 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 ZNF729A6NN14 1252 aaPredicted RBP3.53□□□□□ -1.84
RNF38-201ENST00000259605 WNT7AO00755 349 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 NPFFO15130 113 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 PITX3O75364 302 aa3.53□□□□□ -1.84
RNF38-201ENST00000259605 GYPAP02724 150 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms