RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 NEU3Q9UQ49 428 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 RGPD3A6NKT7 1758 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 RGPD4Q7Z3J3 1758 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 IFITM5A6NNB3 132 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 H0YL77 283 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 VENTXO95231 258 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 FBXO45P0C2W1 286 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 CD68P34810 354 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 WASP42768 502 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 TMEM33P57088 247 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 RPS24P62847 133 aaKnown RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 HIST1H1AQ02539 215 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 IZUMO4Q1ZYL8 232 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 C18orf21Q32NC0 220 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 TM4SF20Q53R12 229 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 DUX4L9Q6RFH8 374 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 PLXDC2Q6UX71 529 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 NR2C2APQ86WQ0 139 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 PAAF1Q9BRP4 392 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 PHPT1Q9NRX4 125 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 INSIG2Q9Y5U4 225 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 IER3IP1Q9Y5U9 82 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 PROB1E7EW31 1015 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 H3BNC9 293 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 FUT3P21217 361 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 UBE2NP61088 152 aaKnown RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 POM121L1PQ3SYA9 428 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 Q499Y3 187 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 C9orf153Q5TBE3 101 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 OR1L3Q8NH93 324 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 GPX7Q96SL4 187 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 R3HDMLQ9H3Y0 253 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 POLR3KQ9Y2Y1 108 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 TMEM8BA6NDV4 472 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 CD300LBA8K4G0 201 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 FGF16O43320 207 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 ACVRL1P37023 503 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 ZP1P60852 638 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 MEF2BQ02080 365 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 TXNDC8Q6A555 127 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 UNQ6494/PRO21346Q6UXR6 183 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 SPAG8Q99932 426 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 Q9N2J8 555 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 ADAMTSL1Q8N6G6 1762 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 GPR183P32249 361 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 RAB32Q13637 225 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 OR8B8Q15620 311 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 DCAF12L2Q5VW00 463 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 MRPL43Q8N983 215 aaKnown RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 OR2AJ1Q8NGZ0 328 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 VSTM2AQ8TAG5 236 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF418Q8TF45 676 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 MVB12AQ96EY5 273 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 KAT6AQ92794 2004 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 TRAV9-2A0A087WT02 112 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 NSG1A0A0A6YYJ2 146 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OR2J3O76001 311 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 TACR1P25103 407 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC25A35Q3KQZ1 300 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 NOXRED1Q6NXP6 359 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 COMMD6Q7Z4G1 85 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 CLEC1AQ8NC01 280 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OR5AN1Q8NGI8 311 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MCHR1Q99705 422 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MS4A5Q9H3V2 200 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 CDH20Q9HBT6 801 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MYH9P35579 1960 aaKnown RBP5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 SNURFLB1AK76 121 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 HHLA1C9JL84 531 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 CHEK1O14757 476 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MPC1LP0DKB6 136 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 ACP5P13686 325 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MMP9P14780 707 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 NKX2-1P43699 371 aaPredicted RBP5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 SHISA2Q6UWI4 295 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 Q6ZVU0 165 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 AMZ2Q86W34 360 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 ACOT4Q8N9L9 421 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 DOK4Q8TEW6 326 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 NKX2-4Q9H2Z4 354 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC17A4Q9Y2C5 497 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF840PA6NDX5 716 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 PPIAL4DF5H284 164 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM72CH0Y354 149 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 CD22P20273 847 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 GZMHP20718 246 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 RPS16P62249 146 aaKnown RBP5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM72AQ5TYM5 149 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM72DQ6L9T8 149 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM72BQ86X60 149 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 CILP2Q8IUL8 1156 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 C1orf162Q8NEQ5 155 aaPredicted RBP5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC2A4RGQ9NR83 387 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 LRP12Q9Y561 859 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MICAL3Q7RTP6 2002 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 TRAV38-1A0A0B4J264 116 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 KIR2DS1A0A191URI9 304 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OOEPA6NGQ2 149 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 LOC730098B7Z3J9 87 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms