RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 GLIPR1P48060 266 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 RPL15P61313 204 aaKnown RBP18.64■□□□□ 0.57
LSM4-201ENST00000252816 AESQ08117 197 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 RIPK1Q13546 671 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 LHFPL4Q7Z7J7 247 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 CHST4Q8NCG5 386 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 Q8NFD4 153 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 COQ2Q96H96 371 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 OR14A2Q96R54 314 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 MEGF9Q9H1U4 602 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 PAK1IP1Q9NWT1 392 aaPredicted RBP18.64■□□□□ 0.57
LSM4-201ENST00000252816 ERGIC3Q9Y282 383 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 BTBD17A6NE02 478 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 FAM90A8PA6NJQ4 464 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 POM121CA8CG34 1229 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 ODF3BA8MYP8 253 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 MMP23AO75900 390 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 ZNF93P35789 620 aaPredicted RBP18.63■□□□□ 0.57
LSM4-201ENST00000252816 RSU1Q15404 277 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 PIGYQ3MUY2 71 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 LDLRAD2Q5SZI1 272 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 RNLSQ5VYX0 342 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 GDPGP1Q6ZNW5 385 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 OR11H6Q8NGC7 330 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 OR51T1Q8NGJ9 327 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 OR13D1Q8NGV5 346 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 OR4F5Q8NH21 305 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 SSX3Q99909 188 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 UBE2J1Q9Y385 318 aaPredicted RBP18.63■□□□□ 0.57
LSM4-201ENST00000252816 NBEAL1Q6ZS30 2694 aa18.63■□□□□ 0.57
LSM4-201ENST00000252816 TRAV24A0A0B4J272 114 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 H3BUX3 64 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 HTR3BO95264 441 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 CSN2P05814 226 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 CD1AP06126 327 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 LGALS4P56470 323 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 TRAPPC6BQ86SZ2 158 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 DYNAPQ8N1N2 210 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 OR5R1Q8NH85 324 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 DERL3Q96Q80 235 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 ZNF184Q99676 751 aaPredicted RBP18.62■□□□□ 0.57
LSM4-201ENST00000252816 ING3Q9NXR8 418 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 ING4Q9UNL4 249 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 SESN1Q9Y6P5 492 aa18.62■□□□□ 0.57
LSM4-201ENST00000252816 ODAMA1E959 279 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 HSPB6O14558 160 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 PIN1P1O15428 100 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 CLPXO76031 633 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 ARG1P05089 322 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 FSTP19883 344 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 MYF6P23409 242 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 IL13RA2Q14627 380 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 ATXN7L3Q14CW9 347 aaPredicted RBP18.61■□□□□ 0.57
LSM4-201ENST00000252816 ZNF626Q68DY1 528 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 SHISA2Q6UWI4 295 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 CORO2AQ92828 525 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 MYDGFQ969H8 173 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 OR5M11Q96RB7 305 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 MND1Q9BWT6 205 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 CDCA4Q9BXL8 241 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 PPIL3Q9H2H8 161 aaKnown RBP18.61■□□□□ 0.57
LSM4-201ENST00000252816 BEX1Q9HBH7 125 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 SCN3BQ9NY72 215 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 IL36GQ9NZH8 169 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 ZNF581Q9P0T4 197 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 CKLFQ9UBR5 152 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 LSM2Q9Y333 95 aaKnown RBP18.61■□□□□ 0.57
LSM4-201ENST00000252816 KIAA2026Q5HYC2 2103 aa18.61■□□□□ 0.57
LSM4-201ENST00000252816 TRGV10A0A0A0MS01 117 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 FUOMA2VDF0 154 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 TGFBR2P37173 567 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 SLC35A2P78381 396 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 LRRC75BQ2VPJ9 315 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 KRBOX4Q5JUW0 171 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 BAIAP2L2Q6UXY1 529 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 ANKRD60Q9BZ19 345 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 METTL9Q9H1A3 318 aa18.6■□□□□ 0.57
LSM4-201ENST00000252816 A0A1B0GUS0 222 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 CLPSL1A2RUU4 121 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 BDH1Q02338 343 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 DYNC1I2Q13409 638 aaKnown RBP18.59■□□□□ 0.57
LSM4-201ENST00000252816 IRF3Q14653 427 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 LY6EQ16553 131 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 AANATQ16613 207 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 PAN3Q58A45 887 aaKnown RBP18.59■□□□□ 0.57
LSM4-201ENST00000252816 PRAMEF5Q5TYX0 476 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 OLFML2AQ68BL7 652 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 DHRS7BQ6IAN0 325 aaPredicted RBP18.59■□□□□ 0.57
LSM4-201ENST00000252816 IZUMO2Q6UXV1 221 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 Q6ZSV7 163 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 PIFOQ8TCI5 191 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 TMEM133Q9H2Q1 129 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 FOXJ3Q9UPW0 622 aa18.59■□□□□ 0.57
LSM4-201ENST00000252816 TBL2Q9Y4P3 447 aaKnown RBP18.59■□□□□ 0.57
LSM4-201ENST00000252816 IGHV2-26A0A0B4J1V2 119 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 A0A1W2PP11 408 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 GDNFP39905 211 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 INSL4Q14641 139 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 LINC01006Q8NI28 216 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 WFDC12Q8WWY7 111 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms