RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 UMAD1C9J7I0 102 aa14.7□□□□□ -0.06
FOXA1-201ENST00000250448 FHITP49789 147 aa14.7□□□□□ -0.06
FOXA1-201ENST00000250448 SUCLG1P53597 346 aaKnown RBP14.7□□□□□ -0.06
FOXA1-201ENST00000250448 CLDN17P56750 224 aa14.7□□□□□ -0.06
FOXA1-201ENST00000250448 LSM6P62312 80 aaKnown RBP14.7□□□□□ -0.06
FOXA1-201ENST00000250448 FOXO1Q12778 655 aa14.7□□□□□ -0.06
FOXA1-201ENST00000250448 TMEM187Q14656 261 aa14.7□□□□□ -0.06
FOXA1-201ENST00000250448 RPUSD3Q6P087 351 aaKnown RBP14.7□□□□□ -0.06
FOXA1-201ENST00000250448 TOMM40LQ969M1 308 aa14.7□□□□□ -0.06
FOXA1-201ENST00000250448 A0A087WZY1 265 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 XRCC2O43543 280 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 TLX3O43711 291 aaPredicted RBP14.69□□□□□ -0.06
FOXA1-201ENST00000250448 MSR1P21757 451 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 SLC35A1P78382 337 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 SP6Q3SY56 376 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 KCNIP3Q9Y2W7 256 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 SPENQ96T58 3664 aaKnown RBP14.69□□□□□ -0.06
FOXA1-201ENST00000250448 OR5H15A6NDH6 313 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 DIRAS3O95661 229 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 OR5AC1P0C628 307 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 B3GALT5-AS1P59052 145 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 ZNF239Q16600 458 aaKnown RBP14.69□□□□□ -0.06
FOXA1-201ENST00000250448 PLXDC2Q6UX71 529 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 PIGQQ9BRB3 760 aa14.69□□□□□ -0.06
FOXA1-201ENST00000250448 STRAPQ9Y3F4 350 aaKnown RBP14.69□□□□□ -0.06
FOXA1-201ENST00000250448 IGHV2-5P01817 119 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 ZNF728P0DKX0 622 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 CCL11P51671 97 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 ABCA11PQ4W5N1 156 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.68□□□□□ -0.06
FOXA1-201ENST00000250448 GJC3Q8NFK1 279 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 OR2M7Q8NG81 312 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 C1QL1O75973 258 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 PRH1P02810 166 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 SULT1A1P50225 295 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 RAC1P63000 192 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 ENDOGQ14249 297 aaKnown RBP14.68□□□□□ -0.06
FOXA1-201ENST00000250448 RHEBQ15382 184 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 HPSE2Q8WWQ2 592 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 GALNT14Q96FL9 552 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 NECAP2Q9NVZ3 263 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 AK3Q9UIJ7 227 aa14.68□□□□□ -0.06
FOXA1-201ENST00000250448 CD82P27701 267 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 SRD5A2P31213 254 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 GUCA1AP43080 201 aaPredicted RBP14.67□□□□□ -0.06
FOXA1-201ENST00000250448 CSNK1A1P48729 337 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 RAB5CP51148 216 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 GPR157Q5UAW9 335 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 LYZL2Q7Z4W2 148 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 OR1J1Q8NGS3 322 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 RTN4IP1Q8WWV3 396 aaPredicted RBP14.67□□□□□ -0.06
FOXA1-201ENST00000250448 SRXN1Q9BYN0 137 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 SH3BGRL3Q9H299 93 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 NELFAQ9H3P2 528 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 ZDHHC8Q9ULC8 765 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 HDGFL3Q9Y3E1 203 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 APC2O95996 2303 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 ZNF850A8MQ14 1090 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 H7C1Q1 480 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 OR8U8P0C7N1 319 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 NR2C1P13056 603 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 LMO1P25800 156 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 Q6ZSR3 168 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 FAM24BQ8N5W8 94 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 MALSU1Q96EH3 234 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 FAAP24Q9BTP7 215 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 PBDC1Q9BVG4 233 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 GPR173Q9NS66 373 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 ABI3Q9P2A4 366 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 SPTBN4Q9H254 2564 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 A0A1W2PPE2 198 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 ARG1P05089 322 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 TMEM11P17152 192 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 OPRM1P35372 400 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 RRADP55042 308 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 CASP6P55212 293 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 CD300LFQ8TDQ1 290 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 SUCNR1Q9BXA5 334 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 SLC35B3Q9H1N7 401 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 OR51M1Q9H341 326 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 KCNJ16Q9NPI9 418 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 FBXO7Q9Y3I1 522 aa14.67□□□□□ -0.06
FOXA1-201ENST00000250448 LOC102725191A0A1B0GVB3 256 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 EIF1BO60739 113 aaKnown RBP14.66□□□□□ -0.06
FOXA1-201ENST00000250448 NQO2P16083 231 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 MAGEA5P43359 124 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 PHYHD1Q5SRE7 291 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 TSPO2Q5TGU0 170 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 LRTM2Q8N967 370 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 HSD17B11Q8NBQ5 300 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 C10orf35Q96D05 121 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 C18orf12Q96KH6 178 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 RSRP1Q9BUV0 290 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 METTL9Q9H1A3 318 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 CACNA1GO43497 2377 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 RTTNQ86VV8 2226 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 ZNF205O95201 554 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 DTYMKP23919 212 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 FXYD4P59646 89 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 IL13RA2Q14627 380 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms