RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SHARPINQ9H0F6 387 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 LHX6Q9UPM6 363 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 HS3ST1O14792 307 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 BET1O15155 118 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 TPT1P13693 172 aaKnown RBP18.51■□□□□ 0.55
CLN6-201ENST00000249806 NOVA1P51513 510 aaKnown RBP18.51■□□□□ 0.55
CLN6-201ENST00000249806 ZNF585AQ6P3V2 769 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 FAM214BQ7L5A3 538 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 ZNF573Q86YE8 665 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 CNEP1R1Q8N9A8 125 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 BOLLQ8N9W6 283 aaKnown RBP18.51■□□□□ 0.55
CLN6-201ENST00000249806 OR2J1Q9GZK6 312 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 NUP50Q9UKX7 468 aa18.51■□□□□ 0.55
CLN6-201ENST00000249806 UCP3P55916 312 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 UBE2NP61088 152 aaKnown RBP18.5■□□□□ 0.55
CLN6-201ENST00000249806 RSRP1Q9BUV0 290 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 OR2S2Q9NQN1 319 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 TUBD1Q9UJT1 453 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 OR5B21A6NL26 309 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 TGFBR3Q03167 851 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 HERPUD1Q15011 391 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 OR2A2Q6IF42 318 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 C20orf204Q6ZNR8 217 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 EIF4E3Q8N5X7 224 aaKnown RBP18.5■□□□□ 0.55
CLN6-201ENST00000249806 SUMF2Q8NBJ7 301 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 SUN5Q8TC36 379 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 RDH5Q92781 318 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 SLC5A7Q9GZV3 580 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 OR51I2Q9H344 312 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 PLSCR2Q9NRY7 297 aa18.5■□□□□ 0.55
CLN6-201ENST00000249806 LSM5Q9Y4Y9 91 aaKnown RBP18.5■□□□□ 0.55
CLN6-201ENST00000249806 PRSS44E7EML9 344 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 SMPD2O60906 423 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 LRP3O75074 770 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 SCGB1D2O95969 90 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 HKR1P10072 659 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 GNRHRP30968 328 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 TMED6Q8WW62 240 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 MSI2Q96DH6 328 aaKnown RBP18.49■□□□□ 0.55
CLN6-201ENST00000249806 SYT3Q9BQG1 590 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 GLRX2Q9NS18 164 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 TAS2R3Q9NYW6 316 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 DNAJB11Q9UBS4 358 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 TRAV17A0A0B4J275 112 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 PHF1O43189 567 aaPredicted RBP18.49■□□□□ 0.55
CLN6-201ENST00000249806 NAAAQ02083 359 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 ALKBH6Q3KRA9 238 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 LIAT1Q6ZQX7 453 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 Q6ZS49 121 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 TP53RKQ96S44 253 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 SUCNR1Q9BXA5 334 aa18.49■□□□□ 0.55
CLN6-201ENST00000249806 ZFHX2Q9C0A1 2572 aaPredicted RBP18.48■□□□□ 0.55
CLN6-201ENST00000249806 IGHV3-64DA0A0J9YX35 117 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 KRBOX1C9JBD0 128 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 DEDDO75618 318 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 PPP1CBP62140 327 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 IL24Q13007 206 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 GABRA6Q16445 453 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 VWA1Q6PCB0 445 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 FAM58AQ8N1B3 248 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.48■□□□□ 0.55
CLN6-201ENST00000249806 LHFPL5Q8TAF8 219 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 C18orf12Q96KH6 178 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 FAM86C1Q9NVL1 165 aa18.48■□□□□ 0.55
CLN6-201ENST00000249806 TRAV24A0A0B4J272 114 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 FBXW12Q6X9E4 464 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 Q6ZT83 130 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 WDR86Q86TI4 376 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 C9orf106Q8NAJ2 232 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 GALNT11Q8NCW6 608 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 GPHA2Q96T91 129 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 IGKV1-6A0A0C4DH72 117 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 A0A1B0GW55 424 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 TPD52L2O43399 206 aaKnown RBP18.47■□□□□ 0.55
CLN6-201ENST00000249806 TK1P04183 234 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DUX4L2P0CJ85 424 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DUX4L3P0CJ86 424 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DUX4L4P0CJ87 422 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DUX4L5P0CJ88 424 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DUX4L6P0CJ89 424 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DUX4L7P0CJ90 424 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 KIR2DL2P43627 348 aaPredicted RBP18.47■□□□□ 0.55
CLN6-201ENST00000249806 GUSBP1Q15486 140 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 LRTM2Q8N967 370 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 OR1S2Q8NGQ3 325 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 SECTM1Q8WVN6 248 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 PLK3Q9H4B4 646 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 CDH20Q9HBT6 801 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 ZC4H2Q9NQZ6 224 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DUX4Q9UBX2 424 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 MGAQ8IWI9 3026 aa18.47■□□□□ 0.55
CLN6-201ENST00000249806 DIRAS3O95661 229 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 MBPP02686 304 aaPredicted RBP18.46■□□□□ 0.55
CLN6-201ENST00000249806 MRPL49Q13405 166 aaKnown RBP18.46■□□□□ 0.55
CLN6-201ENST00000249806 SRSF7Q16629 238 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLN6-201ENST00000249806 MEX3BQ6ZN04 569 aaKnown RBP18.46■□□□□ 0.55
CLN6-201ENST00000249806 DNTTIP1Q9H147 329 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 PCDHB10Q9UN67 800 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 ATP23Q9Y6H3 246 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 INTS1Q8N201 2190 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms