RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CLINT1Q14677 625 aa21.97■■□□□ 1.11
RAB40C-201ENST00000248139 VASH2Q86V25 355 aa21.97■■□□□ 1.11
RAB40C-201ENST00000248139 LGI3Q8N145 548 aa21.97■■□□□ 1.11
RAB40C-201ENST00000248139 C1QTNF5Q9BXJ0 243 aa21.97■■□□□ 1.11
RAB40C-201ENST00000248139 FAM24AA6NFZ4 105 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 SPP1P10451 314 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 HPSE2Q8WWQ2 592 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 USB1Q9BQ65 265 aaKnown RBP21.96■■□□□ 1.11
RAB40C-201ENST00000248139 SUCNR1Q9BXA5 334 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 NBEAQ8NFP9 2946 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 KCNJ3P48549 501 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 LINC00696Q6ZRV3 163 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 RAB11FIP2Q7L804 512 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 ZNF100Q8IYN0 542 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 LINC00518Q8N0U6 118 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 NEK7Q8TDX7 302 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 RGCCQ9H4X1 137 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 CFAP47Q6ZTR5 3102 aa21.96■■□□□ 1.11
RAB40C-201ENST00000248139 DSPP15924 2871 aaKnown RBP21.96■■□□□ 1.11
RAB40C-201ENST00000248139 TNFSF12O43508 249 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 PRH1P02810 166 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 SERPINA7P05543 415 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 DAOP14920 347 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 MAGEA5P43359 124 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 POLR2GP62487 172 aaKnown RBP eCLIP21.95■■□□□ 1.1
RAB40C-201ENST00000248139 SYT3Q9BQG1 590 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 SPENQ96T58 3664 aaKnown RBP21.95■■□□□ 1.1
RAB40C-201ENST00000248139 IGKV1D-13A0A0B4J2D9 117 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 C3orf85A0A1B0GTC6 90 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 MPPED1O15442 326 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 ST8SIA3O43173 380 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 LILRA1O75019 489 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 IGKV1-13P0DP09 117 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 SSPNQ14714 243 aa21.95■■□□□ 1.1
RAB40C-201ENST00000248139 NEURL1O76050 574 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 DVL1P1P54792 670 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-201ENST00000248139 RSRP1Q9BUV0 290 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 FAM212BQ9NTI7 297 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-201ENST00000248139 IL36GQ9NZH8 169 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 MTCH1Q9NZJ7 389 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 HSD17B6O14756 317 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 GPR137BO60478 399 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 CAMLGP49069 296 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 PEA15Q15121 130 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 ZNF818PQ6ZRF7 136 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 TBC1D26Q86UD7 250 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 CLCC1Q96S66 551 aa21.94■■□□□ 1.1
RAB40C-201ENST00000248139 EIF5A2Q9GZV4 153 aaKnown RBP21.94■■□□□ 1.1
RAB40C-201ENST00000248139 ZNF552Q9H707 407 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-201ENST00000248139 TMEM265A0A087WTH1 108 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 SYNGR1O43759 233 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 ZNF528Q3MIS6 628 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 TMEM211Q6ICI0 200 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 TMEM182Q6ZP80 229 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-201ENST00000248139 ABHD14AQ9BUJ0 271 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 ESRP2Q9H6T0 727 aaKnown RBP21.93■■□□□ 1.1
RAB40C-201ENST00000248139 FOXJ2Q9P0K8 574 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 COLQQ9Y215 455 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-201ENST00000248139 ZNF732B4DXR9 585 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 GLAP06280 429 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 HERPUD1Q15011 391 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 CXorf66Q5JRM2 361 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-201ENST00000248139 LRTM2Q8N967 370 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 OR2M7Q8NG81 312 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 SPSB4Q96A44 273 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 CACFD1Q9UGQ2 172 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 UBE2J1Q9Y385 318 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-201ENST00000248139 LHX2P50458 406 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 GAPTQ8N292 157 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 ZNF391Q9UJN7 358 aa21.93■■□□□ 1.1
RAB40C-201ENST00000248139 B4E171 279 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 IGHEP01854 428 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 TSPAN7P41732 249 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 RAB13P51153 203 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 ESPL1Q14674 2120 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 ISOC2Q96AB3 205 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 IP6K3Q96PC2 410 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 REPIN1Q9BWE0 567 aaKnown RBP21.92■■□□□ 1.1
RAB40C-201ENST00000248139 PRDM14Q9GZV8 571 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 FBXO7Q9Y3I1 522 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 PQLC2LA1A4F0 135 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 RPL36A-HNRNPH2H7BZ11 118 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 DANCRP0C864 163 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 SNCAP37840 140 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 MRPL21Q7Z2W9 205 aaKnown RBP21.92■■□□□ 1.1
RAB40C-201ENST00000248139 C1orf210Q8IVY1 113 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 C17orf78Q8N4C9 275 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 OR4D5Q8NGN0 318 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 RPS10P5Q9NQ39 176 aa21.92■■□□□ 1.1
RAB40C-201ENST00000248139 FBXO9Q9UK97 447 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-201ENST00000248139 ZFHX4Q86UP3 3567 aa21.91■■□□□ 1.1
RAB40C-201ENST00000248139 C9orf172C9J069 976 aa21.91■■□□□ 1.1
RAB40C-201ENST00000248139 SNRNP70P08621 437 aaKnown RBP21.91■■□□□ 1.1
RAB40C-201ENST00000248139 JMJD7P0C870 316 aa21.91■■□□□ 1.1
RAB40C-201ENST00000248139 P2RY1P47900 373 aa21.91■■□□□ 1.1
RAB40C-201ENST00000248139 GUK1Q16774 197 aa21.91■■□□□ 1.1
RAB40C-201ENST00000248139 PEAR1Q5VY43 1037 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-201ENST00000248139 COLCA1Q6ZS62 124 aa21.91■■□□□ 1.1
RAB40C-201ENST00000248139 C14orf79Q96F83 325 aa21.91■■□□□ 1.1
RAB40C-201ENST00000248139 TECTAO75443 2155 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms