RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ISG15P05161 165 aa13.85□□□□□ -0.19
SIN3B-201ENST00000248054 IL13RA2Q14627 380 aa13.85□□□□□ -0.19
SIN3B-201ENST00000248054 TIGITQ495A1 244 aa13.85□□□□□ -0.19
SIN3B-201ENST00000248054 APCDD1LQ8NCL9 501 aa13.85□□□□□ -0.19
SIN3B-201ENST00000248054 CHST5Q9GZS9 411 aa13.85□□□□□ -0.19
SIN3B-201ENST00000248054 OSGIN2Q9Y236 505 aa13.85□□□□□ -0.19
SIN3B-201ENST00000248054 SIRT4Q9Y6E7 314 aaPredicted RBP13.85□□□□□ -0.19
SIN3B-201ENST00000248054 TMIGD3P0DMS9 266 aaPredicted RBP13.84□□□□□ -0.19
SIN3B-201ENST00000248054 PPP1CBP62140 327 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 THNSL2Q86YJ6 484 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 SMIM7Q9BQ49 75 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 KIR3DL2P43630 455 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 NCR3LG1Q68D85 454 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 FDX2Q6P4F2 183 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 OR13D1Q8NGV5 346 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 FABP4P15090 132 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 PI3P19957 117 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 RAB5AP20339 215 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 NANOS3P60323 173 aaKnown RBP13.84□□□□□ -0.19
SIN3B-201ENST00000248054 LINC00114Q6XXX2 140 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 OR4F5Q8NH21 305 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 OR4F4Q96R69 305 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 KLHDC2Q9Y2U9 406 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 MS4A18H0YCH9 400 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 NUBP1P53384 320 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 RTL8BQ17RB0 113 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 MS4A18Q3C1V0 323 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 RPS4Y2Q8TD47 263 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 POM121Q96HA1 1249 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 RAB40CQ96S21 281 aa13.84□□□□□ -0.19
SIN3B-201ENST00000248054 SF3B6Q9Y3B4 125 aaKnown RBP13.84□□□□□ -0.19
SIN3B-201ENST00000248054 TRGV8A0A0C4DH27 118 aa13.83□□□□□ -0.19
SIN3B-201ENST00000248054 WDR1O75083 606 aa13.83□□□□□ -0.19
SIN3B-201ENST00000248054 ZIC2O95409 532 aaPredicted RBP13.83□□□□□ -0.19
SIN3B-201ENST00000248054 ADRA2AP08913 450 aa13.83□□□□□ -0.19
SIN3B-201ENST00000248054 HABP2Q14520 560 aaPredicted RBP13.83□□□□□ -0.19
SIN3B-201ENST00000248054 GUK1Q16774 197 aa13.83□□□□□ -0.19
SIN3B-201ENST00000248054 LCN15Q6UWW0 184 aa13.83□□□□□ -0.19
SIN3B-201ENST00000248054 PGLYRP3Q96LB9 341 aa13.83□□□□□ -0.19
SIN3B-201ENST00000248054 KNTC1P50748 2209 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 TRAV8-7A0A075B6U6 113 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 TGFBR3LH3BV60 316 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 RANP62826 216 aaKnown RBP13.83□□□□□ -0.2
SIN3B-201ENST00000248054 RIPPLY2Q5TAB7 128 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 FBXW9Q5XUX1 488 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 OR2T2Q6IF00 324 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 INO80CQ6PI98 192 aaPredicted RBP13.83□□□□□ -0.2
SIN3B-201ENST00000248054 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 ZNF385AQ96PM9 386 aaKnown RBP13.83□□□□□ -0.2
SIN3B-201ENST00000248054 S1PR3Q99500 378 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 CCDC88CQ9P219 2028 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 THY1P04216 161 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 DAOP14920 347 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 PPP1R1AQ13522 171 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 C20orf196Q8IYI0 205 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 GALMQ96C23 342 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 AUP1Q9Y679 476 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 ACAA1P09110 424 aaPredicted RBP13.83□□□□□ -0.2
SIN3B-201ENST00000248054 EDN3P14138 238 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 UBE2G1P62253 170 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 H1FXQ92522 213 aaKnown RBP13.83□□□□□ -0.2
SIN3B-201ENST00000248054 NMES1Q9C002 83 aa13.83□□□□□ -0.2
SIN3B-201ENST00000248054 PRR19A6NJB7 356 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 MGST1P10620 155 aaKnown RBP13.82□□□□□ -0.2
SIN3B-201ENST00000248054 ZNF90Q03938 601 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 ZNF124Q15973 351 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 C4orf17Q53FE4 359 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 DCAF12L2Q5VW00 463 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 ABHD3Q8WU67 409 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 TLNRD1Q9H1K6 362 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 TDRD6O60522 2096 aaKnown RBP13.82□□□□□ -0.2
SIN3B-201ENST00000248054 CLN5O75503 358 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 TTRP02766 147 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 NDUFB7P17568 137 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 TMEM123Q8N131 208 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 PPP1R14DQ9NXH3 145 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 ZNF586Q9NXT0 402 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 FAM221AA4D161 298 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 TIAF1O95411 115 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 CELA2AP08217 269 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 SPATA46Q5T0L3 261 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 UNQ9370/PRO34162Q6UXP9 181 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 BATF2Q8N1L9 274 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 COA4Q9NYJ1 87 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 PPP1R3CQ9UQK1 317 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 MMP24Q9Y5R2 645 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 CKAP5Q14008 2032 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 UPK3AO75631 287 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 BPIFB3P59826 476 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 COTL1Q14019 142 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 PECRQ9BY49 303 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 REG4Q9BYZ8 158 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 CXXC4Q9H2H0 198 aa13.82□□□□□ -0.2
SIN3B-201ENST00000248054 ARG1P05089 322 aa13.81□□□□□ -0.2
SIN3B-201ENST00000248054 FOXL2P58012 376 aa13.81□□□□□ -0.2
SIN3B-201ENST00000248054 EGR4Q05215 589 aa13.81□□□□□ -0.2
SIN3B-201ENST00000248054 DCAF16Q9NXF7 216 aa13.81□□□□□ -0.2
SIN3B-201ENST00000248054 GALR2O43603 387 aaPredicted RBP13.81□□□□□ -0.2
SIN3B-201ENST00000248054 UCNP55089 124 aa13.81□□□□□ -0.2
SIN3B-201ENST00000248054 LINC01590Q5TEZ4 76 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms