RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 FAM90A13PP0C7W8 464 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 FAM90A14PP0C7W9 464 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 FAM90A24PP0C7X0 464 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 TNFSF8P32971 234 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 LINC00596Q86U02 117 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 OR56B1Q8NGI3 324 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 OR6Q1Q8NGQ2 317 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 PLPPR1Q8TBJ4 325 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 FAAP24Q9BTP7 215 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 PECRQ9BY49 303 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 SEBOXQ9HB31 216 aaPredicted RBP16.74■□□□□ 0.27
SNRPA-201ENST00000243563 PATZ1Q9HBE1 687 aaKnown RBP16.74■□□□□ 0.27
SNRPA-201ENST00000243563 KAAG1Q9UBP8 84 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 ITGB1BP2Q9UKP3 347 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 PEX16Q9Y5Y5 336 aa16.74■□□□□ 0.27
SNRPA-201ENST00000243563 SETXQ7Z333 2677 aaKnown RBP16.74■□□□□ 0.27
SNRPA-201ENST00000243563 NKX6-3A6NJ46 265 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 FAM25AB3EWG3 89 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 FAM25CB3EWG5 89 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 FAM25GB3EWG6 89 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 RPS2P15880 293 aaKnown RBP16.73■□□□□ 0.27
SNRPA-201ENST00000243563 GNB3P16520 340 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 IL13RA1P78552 427 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 CNIH2Q6PI25 160 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 PRSS57Q6UWY2 283 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 MAPK1IP1LQ8NDC0 245 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 TMEM185AQ8NFB2 350 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 GCDHQ92947 438 aaPredicted RBP16.73■□□□□ 0.27
SNRPA-201ENST00000243563 DPCDQ9BVM2 203 aaPredicted RBP16.73■□□□□ 0.27
SNRPA-201ENST00000243563 DNTTIP1Q9H147 329 aa16.73■□□□□ 0.27
SNRPA-201ENST00000243563 UBE2QL1A1L167 161 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 METTL21EPA6NDL7 271 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 DVL1O14640 695 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 TK1P04183 234 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 FUT3P21217 361 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 ATXN7L3Q14CW9 347 aaPredicted RBP16.72■□□□□ 0.27
SNRPA-201ENST00000243563 PAN3Q58A45 887 aaKnown RBP16.72■□□□□ 0.27
SNRPA-201ENST00000243563 Q6ZPA2 131 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 ZNF561Q8N587 486 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 SPICQ8N5J4 248 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 TPRX1Q8N7U7 411 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 CHST4Q8NCG5 386 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 RAB40AQ8WXH6 277 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 COQ2Q96H96 371 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 HDHD3Q9BSH5 251 aaPredicted RBP16.72■□□□□ 0.27
SNRPA-201ENST00000243563 ING3Q9NXR8 418 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 EXTL2Q9UBQ6 330 aa16.72■□□□□ 0.27
SNRPA-201ENST00000243563 TRAV18A0A075B6X5 111 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 MEX3AA1L020 520 aaKnown RBP16.71■□□□□ 0.27
SNRPA-201ENST00000243563 RNF223E7ERA6 249 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 K7N7A8 449 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 MFNGO00587 321 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 RANBP1P43487 201 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 KCNJ8Q15842 424 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 RAB3CQ96E17 227 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 CMTM3Q96MX0 182 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 WDFY2Q96P53 400 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 GLS2Q9UI32 602 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 ITPR3Q14573 2671 aa16.71■□□□□ 0.27
SNRPA-201ENST00000243563 PHF1O43189 567 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-201ENST00000243563 NDUFA2O43678 99 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 SLC25A16P16260 332 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 HIST1H1DP16402 221 aaKnown RBP16.7■□□□□ 0.26
SNRPA-201ENST00000243563 GRK1Q15835 563 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 ZNF260Q3ZCT1 412 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 Q6ZTK2 550 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 SLC36A1Q7Z2H8 476 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 ST8SIA4Q92187 359 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 NEIL1Q96FI4 390 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-201ENST00000243563 S100A16Q96FQ6 103 aaKnown RBP16.7■□□□□ 0.26
SNRPA-201ENST00000243563 SNX22Q96L94 193 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 MIOXQ9UGB7 285 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 PCDHB10Q9UN67 800 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 MALRD1Q5VYJ5 2156 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 MED13LQ71F56 2210 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 TMEM235A6NFC5 223 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 FAM157AC9JC47 383 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 XRCC3O43542 346 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 TAS2R20P59543 309 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 AESQ08117 197 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 SHEQ5VZ18 495 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 OR8H2Q8N162 312 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 CIARTQ8N365 385 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-201ENST00000243563 MED30Q96HR3 178 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 DIRAS2Q96HU8 199 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 NEDD4LQ96PU5 975 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 PLEKHJ1Q9NW61 149 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 SLC25A10Q9UBX3 287 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-201ENST00000243563 AK3Q9UIJ7 227 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 HSF4Q9ULV5 492 aa16.7■□□□□ 0.26
SNRPA-201ENST00000243563 KIAA1324LA8MWY0 1029 aaPredicted RBP16.69■□□□□ 0.26
SNRPA-201ENST00000243563 HLA-DQB1P01920 261 aa16.69■□□□□ 0.26
SNRPA-201ENST00000243563 ZFP36P26651 326 aaKnown RBP16.69■□□□□ 0.26
SNRPA-201ENST00000243563 EDDM3AQ14507 147 aa16.69■□□□□ 0.26
SNRPA-201ENST00000243563 CDNFQ49AH0 187 aa16.69■□□□□ 0.26
SNRPA-201ENST00000243563 KIAA2026Q5HYC2 2103 aa16.69■□□□□ 0.26
SNRPA-201ENST00000243563 WDR25Q64LD2 544 aaPredicted RBP16.69■□□□□ 0.26
SNRPA-201ENST00000243563 CCDC190Q86UF4 302 aa16.69■□□□□ 0.26
SNRPA-201ENST00000243563 OR8B3Q8NGG8 313 aa16.69■□□□□ 0.26
SNRPA-201ENST00000243563 POM121Q96HA1 1249 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms