RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 BET1O15155 118 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 SOCS1O15524 211 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 RGS11O94810 467 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 HIST1H1DP16402 221 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNRF1Q8ND25 227 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 LPAR3Q9UBY5 353 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 DISC1C4P0D8 188 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 CD8AP01732 235 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 TK1P04183 234 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 PGAM2P15259 253 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF295-AS1Q8N0V1 137 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 OR6Q1Q8NGQ2 317 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 Q8TCH9 128 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 ARL11Q969Q4 196 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 LURAP1Q96LR2 239 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 NICN1Q9BSH3 213 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 KCNS2Q9ULS6 477 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 CA11O75493 328 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 AESQ08117 197 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 PNLIPRP3Q17RR3 467 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF181Q2M3W8 571 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF782Q6ZMW2 699 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 OCSTAMPQ9BR26 566 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 TMEM246Q9BRR3 403 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 SSBP3Q9BWW4 388 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 BOD1L1Q8NFC6 3051 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 LOC105371242A0A075B767 164 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 LPLP06858 475 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 MPZP25189 248 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 KIF25Q9UIL4 384 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 CEACAM18A8MTB9 384 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF736B4DX44 427 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 PTBP3O95758 552 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 IGHV4-39P01824 125 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZP1P60852 638 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAHD2BQ6P2I3 314 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 NUDCD2Q8WVJ2 157 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 GCDHQ92947 438 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAHD2AQ96GK7 314 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 PECRQ9BY49 303 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 RBM38Q9H0Z9 239 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 LPAR5Q9H1C0 372 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 SCP2D1Q9UJQ7 156 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 WDFY3Q8IZQ1 3526 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 TMEM14DPA8MWL7 114 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZMYND11Q15326 602 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 ABCA11PQ4W5N1 156 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM76BQ5HYJ3 339 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 ELP2Q6IA86 826 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 TRAT1Q6PIZ9 186 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 Q6ZSR3 168 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 MOB1BQ7L9L4 216 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 MRGPRDQ8TDS7 321 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 Q96M66 194 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 Q96MF0 132 aa9.35□□□□□ -0.91
TNFAIP3-201ENST00000237289 DSCAMO60469 2012 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 NOS1APO75052 506 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 GZMHP20718 246 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 HLA-DMAP28067 261 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 NPY4RP50391 375 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 EFNB2P52799 333 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 TAS2R46P59540 309 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 METTL11BQ5VVY1 283 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 WDR86Q86TI4 376 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 GDPD1Q8N9F7 314 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 CREBBPQ92793 2442 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 IGKV1-12A0A0C4DH73 117 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 DVL1O14640 695 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 IGKV1D-12P01611 117 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 EGR1P18146 543 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 BTN2A1Q7KYR7 527 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 TPRX1Q8N7U7 411 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 RFESDQ8TAC1 157 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 GALMQ96C23 342 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 SCPEP1Q9HB40 452 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 CACNA1DQ01668 2161 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 PHF1O43189 567 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 LCN2P80188 198 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF529Q6P280 563 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 RNASE11Q8TAA1 199 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 SLIRPQ9GZT3 109 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 ABCG5Q9H222 651 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 PPIAL4CA0A0B4J2A2 164 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 GPR37O15354 613 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 TGFAP01135 160 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 CSF1P09603 554 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 CTXN2P0C2S0 81 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 PPIAL4GP0DN37 164 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 SRP14P37108 136 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 TMEM155Q4W5P6 130 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 BEST4Q8NFU0 473 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 YIPF5Q969M3 257 aa9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 THAP7Q9BT49 309 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-201ENST00000237289 AUNIPQ9H7T9 357 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms